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    Trp53bp2 transformation related protein 53 binding protein 2 [ Mus musculus (house mouse) ]

    Gene ID: 209456, updated on 9-Dec-2024

    Summary

    Official Symbol
    Trp53bp2provided by MGI
    Official Full Name
    transformation related protein 53 binding protein 2provided by MGI
    Primary source
    MGI:MGI:2138319
    See related
    Ensembl:ENSMUSG00000026510 AllianceGenome:MGI:2138319
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    53BP2; ASPP2; Tp53bp2; PPP1R13A
    Summary
    Predicted to enable NF-kappaB binding activity; p53 binding activity; and protein homodimerization activity. Acts upstream of or within several processes, including embryo development; heart development; and response to ionizing radiation. Predicted to be located in cell junction and cytosol. Predicted to be active in nucleus. Predicted to colocalize with perinuclear region of cytoplasm. Is expressed in several structures, including alimentary system; brain; respiratory system; sensory organ; and urinary system. Used to study chromosome 1q41-q42 deletion syndrome. Orthologous to human TP53BP2 (tumor protein p53 binding protein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in lung adult (RPKM 11.1), CNS E11.5 (RPKM 10.0) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Trp53bp2 in Genome Data Viewer
    Location:
    1 H5; 1 84.93 cM
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (182236737..182289997)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (182409167..182462436)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene F-box protein 28 Neighboring gene STARR-seq mESC enhancer starr_03278 Neighboring gene STARR-positive B cell enhancer mm9_chr1:184271643-184271944 Neighboring gene STARR-positive B cell enhancer ABC_E5879 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E4402 Neighboring gene calpain 2 Neighboring gene STARR-seq mESC enhancer starr_03280 Neighboring gene predicted gene, 37885 Neighboring gene STARR-seq mESC enhancer starr_03281 Neighboring gene STARR-positive B cell enhancer mm9_chr1:184469487-184469788 Neighboring gene predicted gene, 46081 Neighboring gene GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus pseudogene

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables NF-kappaB binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables SH3 domain binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables p53 binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables p53 binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables p53 binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cell junction ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in perinuclear region of cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    colocalizes_with perinuclear region of cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in perinuclear region of cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    apoptosis-stimulating of p53 protein 2
    Names
    p53-binding protein 2
    p53BP2
    tumor protein p53 binding protein, 2
    tumor suppressor p53-binding protein 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173378.3NP_775554.2  apoptosis-stimulating of p53 protein 2

      Status: VALIDATED

      Source sequence(s)
      AC131742
      Consensus CDS
      CCDS48476.1
      UniProtKB/Swiss-Prot
      Q3UYM7, Q8CG79, Q8K2L5
      UniProtKB/TrEMBL
      E9QJU8
      Related
      ENSMUSP00000112508.2, ENSMUST00000117245.2
      Conserved Domains (5) summary
      cd00204
      Location:9421053
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:9361022
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:936962
      ANK; ANK repeat [structural motif]
      cl00155
      Location:1790
      UBQ; Ubiquitin-like proteins
      cl17036
      Location:10661122
      SH3; Src Homology 3 domain superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      182236737..182289997
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)