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    Cplx4 complexin 4 [ Mus musculus (house mouse) ]

    Gene ID: 225644, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cplx4provided by MGI
    Official Full Name
    complexin 4provided by MGI
    Primary source
    MGI:MGI:2685803
    See related
    Ensembl:ENSMUSG00000024519 AllianceGenome:MGI:2685803
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CPXIV; Gm957; A930004D23Rik
    Summary
    Enables SNARE binding activity. Acts upstream of or within regulation of neurotransmitter secretion. Located in synapse. Is expressed in retina outer nuclear layer. Orthologous to human CPLX4 (complexin 4). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Genomic context

    See Cplx4 in Genome Data Viewer
    Location:
    18 E1; 18 39.05 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (66088793..66103249, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (65955722..65970178, complement)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_44855 Neighboring gene STARR-positive B cell enhancer ABC_E7598 Neighboring gene predicted gene, 25150 Neighboring gene retina and anterior neural fold homeobox Neighboring gene STARR-positive B cell enhancer ABC_E1962 Neighboring gene lectin, mannose-binding, 1 Neighboring gene STARR-seq mESC enhancer starr_44856 Neighboring gene collagen and calcium binding EGF domains 1 Neighboring gene STARR-seq mESC enhancer starr_44857 Neighboring gene microRNA 694

    Genomic regions, transcripts, and products

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 
    • Targeted (1)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables SNARE binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables SNARE binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in modulation of chemical synaptic transmission IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in neurotransmitter transport IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within regulation of neurotransmitter secretion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of synaptic vesicle fusion to presynaptic active zone membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in synaptic vesicle exocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in visual perception IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of SNARE complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in terminal bouton IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    complexin-4
    Names
    CPX IV
    complexin IV

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145493.1NP_663468.1  complexin-4

      See identical proteins and their annotated locations for NP_663468.1

      Status: PROVISIONAL

      Source sequence(s)
      BC016082
      Consensus CDS
      CCDS29312.1
      UniProtKB/Swiss-Prot
      Q80WM3, Q8C8Y0, Q91WE5
      Related
      ENSMUSP00000025397.6, ENSMUST00000025397.7
      Conserved Domains (1) summary
      pfam05835
      Location:1140
      Synaphin; Synaphin protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      66088793..66103249 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)