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    1700034E13Rik RIKEN cDNA 1700034E13 gene [ Mus musculus (house mouse) ]

    Gene ID: 78414, updated on 27-Nov-2024

    Summary

    Official Symbol
    1700034E13Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1700034E13 geneprovided by MGI
    Primary source
    MGI:MGI:1925664
    See related
    Ensembl:ENSMUSG00000024532 AllianceGenome:MGI:1925664
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward testis adult (RPKM 65.6) See more
    Orthologs
    NEW
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    Genomic context

    See 1700034E13Rik in Genome Data Viewer
    Location:
    18 D1; 18 28.25 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (52779292..52796803)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (52646220..52663731)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 41724 Neighboring gene zinc finger protein 474 Neighboring gene glycerol kinase-like 1 Neighboring gene predicted gene, 41725

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in cellular_component  

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_030097.1NP_084373.1  zinc finger protein 475

      See identical proteins and their annotated locations for NP_084373.1

      Status: PROVISIONAL

      Source sequence(s)
      BC048563
      Consensus CDS
      CCDS29249.1
      UniProtKB/TrEMBL
      Q9D2T6
      Related
      ENSMUSP00000112845.2, ENSMUST00000118724.8
      Conserved Domains (1) summary
      pfam13913
      Location:79103
      zf-C2HC_2; zinc-finger of a C2HC-type

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      52779292..52796803
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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