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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001401341.1 → NP_001388270.1 ankyrin repeat domain-containing protein 17 isoform c
Status: REVIEWED
- Source sequence(s)
-
AC117578, AC162171
- UniProtKB/TrEMBL
-
E9Q804
-
NM_030886.2 → NP_112148.2 ankyrin repeat domain-containing protein 17 isoform a
See identical proteins and their annotated locations for NP_112148.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (a).
- Source sequence(s)
-
AC140220, AC162171
- Consensus CDS
-
CCDS57354.1
- UniProtKB/Swiss-Prot
- Q3TV99, Q5F4T7, Q6PG69, Q6ZQ66, Q8CHT4, Q99NH0
- UniProtKB/TrEMBL
-
E9Q804
- Related
- ENSMUSP00000014421.9, ENSMUST00000014421.15
- Conserved Domains (9) summary
-
- TIGR02926
Location:801 → 877
- AhaH; ATP synthase archaeal, H subunit
- smart00248
Location:1078 → 1106
- ANK; ankyrin repeats
- COG0666
Location:1042 → 1268
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- cd00105
Location:1723 → 1785
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- cd00204
Location:392 → 516
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam03938
Location:790 → 889
- OmpH; Outer membrane protein (OmpH-like)
- pfam12796
Location:301 → 390
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:1349 → 1402
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:431 → 460
- ANK; ANK repeat [structural motif]
-
NM_198010.2 → NP_932127.2 ankyrin repeat domain-containing protein 17 isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (b) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
AC140220, AC162171
- Consensus CDS
-
CCDS57353.1
- UniProtKB/TrEMBL
- E9Q804, E9QKG6
- Related
- ENSMUSP00000080587.7, ENSMUST00000081914.13
- Conserved Domains (6) summary
-
- COG0666
Location:791 → 1017
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- cd00105
Location:1472 → 1534
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- cd00204
Location:392 → 516
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:301 → 390
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:1098 → 1151
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:431 → 460
- ANK; ANK repeat [structural motif]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000071.7 Reference GRCm39 C57BL/6J
- Range
-
90375025..90517133 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006535289.5 → XP_006535352.3 ankyrin repeat domain-containing protein 17 isoform X3
- UniProtKB/TrEMBL
-
E9Q804
- Conserved Domains (7) summary
-
- smart00248
Location:1117 → 1145
- ANK; ankyrin repeats
- PHA03095
Location:1132 → 1395
- PHA03095; ankyrin-like protein; Provisional
- PHA03247
Location:2147 → 2483
- PHA03247; large tegument protein UL36; Provisional
- cd00105
Location:1762 → 1824
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- sd00045
Location:722 → 751
- ANK; ANK repeat [structural motif]
- pfam03154
Location:1931 → 2359
- Atrophin-1; Atrophin-1 family
- pfam12796
Location:855 → 946
- Ank_2; Ankyrin repeats (3 copies)
-
XM_006535287.5 → XP_006535350.3 ankyrin repeat domain-containing protein 17 isoform X1
- UniProtKB/TrEMBL
-
E9Q804
- Related
- ENSMUSP00000128960.4, ENSMUST00000168058.7
- Conserved Domains (8) summary
-
- PHA03095
Location:1383 → 1646
- PHA03095; ankyrin-like protein; Provisional
- PHA03247
Location:2398 → 2734
- PHA03247; large tegument protein UL36; Provisional
- cd00105
Location:2013 → 2075
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- sd00045
Location:722 → 751
- ANK; ANK repeat [structural motif]
- pfam03154
Location:2182 → 2610
- Atrophin-1; Atrophin-1 family
- pfam12796
Location:855 → 946
- Ank_2; Ankyrin repeats (3 copies)
- pfam03938
Location:1081 → 1180
- OmpH; Outer membrane protein (OmpH-like)
- cl39094
Location:1361 → 1399
- Ank_2; Ankyrin repeats (3 copies)
-
XM_006535288.5 → XP_006535351.3 ankyrin repeat domain-containing protein 17 isoform X2
- UniProtKB/TrEMBL
-
E9Q804
- Conserved Domains (8) summary
-
- PHA03095
Location:1384 → 1647
- PHA03095; ankyrin-like protein; Provisional
- PHA03247
Location:2399 → 2735
- PHA03247; large tegument protein UL36; Provisional
- cd00105
Location:2014 → 2076
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- sd00045
Location:722 → 751
- ANK; ANK repeat [structural motif]
- pfam03154
Location:2183 → 2611
- Atrophin-1; Atrophin-1 family
- pfam12796
Location:855 → 946
- Ank_2; Ankyrin repeats (3 copies)
- pfam03938
Location:1081 → 1180
- OmpH; Outer membrane protein (OmpH-like)
- cl39094
Location:1362 → 1400
- Ank_2; Ankyrin repeats (3 copies)
-
XM_006535290.4 → XP_006535353.1 ankyrin repeat domain-containing protein 17 isoform X5
- UniProtKB/TrEMBL
- A0A0G2JDZ9, E9Q804
- Related
- ENSMUSP00000142575.2, ENSMUST00000197021.2
- Conserved Domains (7) summary
-
- PHA03095
Location:984 → 1247
- PHA03095; ankyrin-like protein; Provisional
- PHA03247
Location:1953 → 2335
- PHA03247; large tegument protein UL36; Provisional
- cd00105
Location:1614 → 1676
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- sd00045
Location:322 → 351
- ANK; ANK repeat [structural motif]
- pfam12796
Location:455 → 546
- Ank_2; Ankyrin repeats (3 copies)
- pfam03938
Location:681 → 780
- OmpH; Outer membrane protein (OmpH-like)
- cl39094
Location:962 → 1000
- Ank_2; Ankyrin repeats (3 copies)
-
XM_036165629.1 → XP_036021522.1 ankyrin repeat domain-containing protein 17 isoform X6
- UniProtKB/TrEMBL
-
E9Q804
- Conserved Domains (7) summary
-
- PHA03095
Location:967 → 1230
- PHA03095; ankyrin-like protein; Provisional
- PHA03247
Location:1936 → 2318
- PHA03247; large tegument protein UL36; Provisional
- sd00045
Location:305 → 334
- ANK; ANK repeat [structural motif]
- pfam03938
Location:664 → 763
- OmpH; Outer membrane protein (OmpH-like)
- pfam12796
Location:438 → 529
- Ank_2; Ankyrin repeats (3 copies)
- cd22502
Location:1596 → 1666
- KH-I_ANKRD17; type I K homology (KH) RNA-binding domain found in ankyrin repeat domain-containing protein 17 (ANKRD17) and similar proteins
- cl39094
Location:945 → 983
- Ank_2; Ankyrin repeats (3 copies)
-
XM_011249595.4 → XP_011247897.3 ankyrin repeat domain-containing protein 17 isoform X4
- UniProtKB/TrEMBL
-
E9Q804
- Conserved Domains (8) summary
-
- smart00248
Location:1369 → 1397
- ANK; ankyrin repeats
- PHA03095
Location:1384 → 1647
- PHA03095; ankyrin-like protein; Provisional
- PHA03247
Location:2142 → 2510
- PHA03247; large tegument protein UL36; Provisional
- cd00105
Location:2014 → 2076
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- sd00045
Location:722 → 751
- ANK; ANK repeat [structural motif]
- pfam03154
Location:2352 → 2606
- Atrophin-1; Atrophin-1 family
- pfam12796
Location:855 → 946
- Ank_2; Ankyrin repeats (3 copies)
- pfam03938
Location:1081 → 1180
- OmpH; Outer membrane protein (OmpH-like)