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    Steap4 STEAP family member 4 [ Mus musculus (house mouse) ]

    Gene ID: 117167, updated on 27-Nov-2024

    Summary

    Official Symbol
    Steap4provided by MGI
    Official Full Name
    STEAP family member 4provided by MGI
    Primary source
    MGI:MGI:1923560
    See related
    Ensembl:ENSMUSG00000012428 AllianceGenome:MGI:1923560
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tiarp; Tnfaip9; 1110021O17Rik
    Summary
    Enables cupric reductase (NADH) activity and ferric-chelate reductase (NADPH) activity. Involved in fat cell differentiation. Acts upstream of or within copper ion import; iron import into cell; and iron ion import across cell outer membrane. Located in endosome and plasma membrane. Is expressed in brain. Orthologous to human STEAP4 (STEAP4 metalloreductase). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in subcutaneous fat pad adult (RPKM 70.3), mammary gland adult (RPKM 51.7) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Steap4 in Genome Data Viewer
    Location:
    5 A1; 5 3.37 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (8010472..8032213)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (7960472..7982213)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene lin-37 homolog pseudogene Neighboring gene STARR-seq mESC enhancer starr_12377 Neighboring gene predicted gene, 30835 Neighboring gene STARR-seq mESC enhancer starr_12379 Neighboring gene predicted gene, 52802 Neighboring gene predicted gene 15731 Neighboring gene 60S ribosomal protein L27 pseudogene Neighboring gene sorcin

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (2)  1 citation

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables FAD binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables cupric reductase (NADH) activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cupric reductase (NADH) activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables electron transfer activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables ferric-chelate reductase (NADPH) activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables ferric-chelate reductase (NADPH) activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables ferric-chelate reductase (NADPH) activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables heme binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in copper ion import IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within copper ion import IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in fat cell differentiation IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    acts_upstream_of_or_within iron import into cell IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within iron ion import across cell outer membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in protein homotrimerization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein homotrimerization ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in early endosome membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
    PubMed 

    General protein information

    Preferred Names
    metalloreductase STEAP4
    Names
    Tnfa-induced adipose-related protein
    dudulin 4
    six-transmembrane epithelial antigen of prostate 4
    tumor necrosis factor, alpha-induced protein 9
    tumor necrosis factor-alpha-induced adipose-related protein
    NP_473439.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_054098.4NP_473439.2  metalloreductase STEAP4

      See identical proteins and their annotated locations for NP_473439.2

      Status: VALIDATED

      Source sequence(s)
      AC133514
      Consensus CDS
      CCDS39008.1
      UniProtKB/Swiss-Prot
      Q91W31, Q91ZE8, Q923B6
      Related
      ENSMUSP00000111081.2, ENSMUST00000115421.3
      Conserved Domains (3) summary
      COG2085
      Location:24201
      COG2085; Predicted dinucleotide-binding enzyme [General function prediction only]
      pfam01794
      Location:251318
      Ferric_reduct; Ferric reductase like transmembrane component
      cl21454
      Location:26190
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      8010472..8032213
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)