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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001136081.3 → NP_001129553.1 FACT complex subunit SSRP1
See identical proteins and their annotated locations for NP_001129553.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate 5' exon structure and differs in the 5' UTR compared to variant 4. All five variants encode the same protein.
- Source sequence(s)
-
AL935159, BX546441
- Consensus CDS
-
CCDS38165.1
- UniProtKB/Swiss-Prot
- Q08943, Q3U9Z2, Q3UJ75, Q4V9U4, Q8CGA6
- UniProtKB/TrEMBL
-
A2AW05
- Related
- ENSMUSP00000127058.2, ENSMUST00000168266.8
- Conserved Domains (2) summary
-
- COG5165
Location:21 → 480
- POB3; Nucleosome-binding factor SPN, POB3 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
- pfam00505
Location:547 → 614
- HMG_box; HMG (high mobility group) box
-
NM_001421071.1 → NP_001408000.1 FACT complex subunit SSRP1
Status: VALIDATED
- Source sequence(s)
-
AL935159, BX546441
- UniProtKB/Swiss-Prot
- Q08943, Q3U9Z2, Q3UJ75, Q4V9U4, Q8CGA6
- UniProtKB/TrEMBL
-
A2AW05
-
NM_001421072.1 → NP_001408001.1 FACT complex subunit SSRP1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) represents the longest transcript. All five variants encode the same protein.
- Source sequence(s)
-
AL935159, BX546441
- UniProtKB/Swiss-Prot
- Q08943, Q3U9Z2, Q3UJ75, Q4V9U4, Q8CGA6
- UniProtKB/TrEMBL
-
A2AW05
-
NM_001421073.1 → NP_001408002.1 FACT complex subunit SSRP1
Status: VALIDATED
- Source sequence(s)
-
AL935159, BX546441
- UniProtKB/Swiss-Prot
- Q08943, Q3U9Z2, Q3UJ75, Q4V9U4, Q8CGA6
- UniProtKB/TrEMBL
-
A2AW05
-
NM_182990.5 → NP_892035.2 FACT complex subunit SSRP1
See identical proteins and their annotated locations for NP_892035.2
Status: VALIDATED
- Source sequence(s)
-
AL935159, BX546441
- Consensus CDS
-
CCDS38165.1
- UniProtKB/Swiss-Prot
- Q08943, Q3U9Z2, Q3UJ75, Q4V9U4, Q8CGA6
- UniProtKB/TrEMBL
-
A2AW05
- Related
- ENSMUSP00000076971.7, ENSMUST00000077798.13
- Conserved Domains (2) summary
-
- COG5165
Location:21 → 480
- POB3; Nucleosome-binding factor SPN, POB3 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
- pfam00505
Location:547 → 614
- HMG_box; HMG (high mobility group) box
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000068.8 Reference GRCm39 C57BL/6J
- Range
-
84867519..84877453
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011239405.2 → XP_011237707.1 FACT complex subunit SSRP1 isoform X2
- Conserved Domains (1) summary
-
- COG5165
Location:21 → 436
- POB3; Nucleosome-binding factor SPN, POB3 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]