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    Enkd1 enkurin domain containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 102124, updated on 9-Dec-2024

    Summary

    Official Symbol
    Enkd1provided by MGI
    Official Full Name
    enkurin domain containing 1provided by MGI
    Primary source
    MGI:MGI:2142593
    See related
    Ensembl:ENSMUSG00000013155 AllianceGenome:MGI:2142593
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    E130303B06Rik
    Summary
    Predicted to enable alpha-tubulin binding activity and microtubule binding activity. Involved in motile cilium assembly and non-motile cilium assembly. Located in 9+0 non-motile cilium; ciliary base; and microtubule organizing center. Is expressed in several structures, including adrenal gland; brain ventricular layer; ileum; male reproductive gland or organ; and sensory organ. Orthologous to human ENKD1 (enkurin domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in testis adult (RPKM 33.5), CNS E11.5 (RPKM 14.3) and 26 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Enkd1 in Genome Data Viewer
    Location:
    8 D3; 8 53.04 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (106430281..106435358, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (105703649..105708221, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene capping protein regulator and myosin 1 linker 2 Neighboring gene STARR-positive B cell enhancer ABC_E3798 Neighboring gene RIKEN cDNA 4933405L10 gene Neighboring gene STARR-positive B cell enhancer ABC_E6678 Neighboring gene par-6 family cell polarity regulator alpha Neighboring gene adrenocortical dysplasia Neighboring gene glucose-fructose oxidoreductase domain containing 2 Neighboring gene STARR-positive B cell enhancer ABC_E8850 Neighboring gene RAN binding protein 10 Neighboring gene STARR-positive B cell enhancer ABC_E2272 Neighboring gene translin-associated factor X (Tsnax) interacting protein 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2)  1 citation
    • Targeted (2) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables alpha-tubulin binding  
    enables alpha-tubulin binding  
    enables microtubule binding  
    enables microtubule binding  
    enables molecular_function  
    enables protein binding PubMed 
    Component Evidence Code Pubs
    located_in 9+0 non-motile cilium PubMed 
    located_in centriole PubMed 
    located_in centriole  
    located_in centrosome PubMed 
    located_in centrosome  
    located_in ciliary basal body PubMed 
    located_in ciliary basal body  
    located_in ciliary base PubMed 
    is_active_in cytoplasmic microtubule  
    located_in cytoplasmic microtubule  
    located_in cytoplasmic microtubule  
    located_in microtubule cytoskeleton  
    located_in spindle pole  

    General protein information

    Preferred Names
    enkurin domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198299.2NP_938041.1  enkurin domain-containing protein 1

      See identical proteins and their annotated locations for NP_938041.1

      Status: VALIDATED

      Source sequence(s)
      AC152826
      Consensus CDS
      CCDS22610.1
      UniProtKB/Swiss-Prot
      Q7TSV9
      Related
      ENSMUSP00000013299.10, ENSMUST00000013299.11
      Conserved Domains (1) summary
      pfam13864
      Location:243337
      Enkurin; Calmodulin-binding

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      106430281..106435358 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006530544.2XP_006530607.1  enkurin domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_006530607.1

      UniProtKB/Swiss-Prot
      Q7TSV9
      Conserved Domains (1) summary
      pfam13864
      Location:243337
      Enkurin; Calmodulin-binding
    2. XM_036153705.1XP_036009598.1  enkurin domain-containing protein 1 isoform X1

      UniProtKB/Swiss-Prot
      Q7TSV9
      Conserved Domains (1) summary
      pfam13864
      Location:243337
      Enkurin; Calmodulin-binding
    3. XM_006530543.2XP_006530606.1  enkurin domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_006530606.1

      UniProtKB/Swiss-Prot
      Q7TSV9
      Related
      ENSMUST00000212716.2
      Conserved Domains (1) summary
      pfam13864
      Location:243337
      Enkurin; Calmodulin-binding

    RNA

    1. XR_387725.2 RNA Sequence

    2. XR_004934741.1 RNA Sequence

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