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    pvdD pyoverdine synthetase D [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 879750, updated on 24-Aug-2024

    Summary

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    Gene symbol
    pvdD
    Gene description
    pyoverdine synthetase D
    Locus tag
    PA2399
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (2657798..2665144, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene pyoverdine biosynthesis protein PvdE Neighboring gene ferripyoverdine receptor Neighboring gene pyoverdine biosynthesis protein PvdJ Neighboring gene peptide synthase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization and genetic manipulation of peptide synthetases in Pseudomonas aeruginosa PAO1 in order to generate novel pyoverdines. Ackerley DF, et al. Chem Biol, 2004 Jul. PMID 15271355
    2. Substrate specificity of the nonribosomal peptide synthetase PvdD from Pseudomonas aeruginosa. Ackerley DF, et al. J Bacteriol, 2003 May. PMID 12700264, Free PMC Article
    3. Quorum-sensing and siderophore biosynthesis in Pseudomonas aeruginosa: lasR/lasI mutants exhibit reduced pyoverdine biosynthesis. Stintzi A, et al. FEMS Microbiol Lett, 1998 Sep 15. PMID 9770291
    4. Nucleotide sequence of pvdD, a pyoverdine biosynthetic gene from Pseudomonas aeruginosa: PvdD has similarity to peptide synthetases. Merriman TR, et al. J Bacteriol, 1995 Jan. PMID 7798141, Free PMC Article
    5. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables catalytic activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables catalytic activity ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within pyoverdine biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pyoverdine synthetase D
    NP_251089.1
    • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      2657798..2665144 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_251089.1 pyoverdine synthetase D [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_251089.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q51338
      Conserved Domains (2) summary
      COG3319
      Location:2171 → 2435
      EntF; Thioesterase domain of type I polyketide synthase or non-ribosomal peptide synthetase [Secondary metabolites biosynthesis, transport and catabolism]
      PRK12467
      Location:13 → 2159
      PRK12467; peptide synthase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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