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    pvdJ pyoverdine biosynthesis protein PvdJ [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 878178, updated on 24-Aug-2024

    Summary

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    Gene symbol
    pvdJ
    Gene description
    pyoverdine biosynthesis protein PvdJ
    Locus tag
    PA2400
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (2665156..2671629, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene ferripyoverdine receptor Neighboring gene pyoverdine synthetase D Neighboring gene peptide synthase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The siderophore pyoverdine of Pseudomonas syringae pv. tabaci 6605 is an intrinsic virulence factor in host tobacco infection. Taguchi F, et al. J Bacteriol, 2010 Jan. PMID 19854904, Free PMC Article
    2. Identification and characterization of novel pyoverdine synthesis genes in Pseudomonas aeruginosa. Lamont IL, et al. Microbiology (Reading), 2003 Apr. PMID 12686626
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables catalytic activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within pyoverdine biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within pyoverdine biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pyoverdine biosynthesis protein PvdJ
    NP_251090.2
    • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      2665156..2671629 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_251090.2 pyoverdine biosynthesis protein PvdJ [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_251090.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q5DIV8
      Conserved Domains (5) summary
      cd05930
      Location:489 → 975
      A_NRPS; The adenylation domain of nonribosomal peptide synthetases (NRPS)
      COG1020
      Location:241 → 903
      EntF; Non-ribosomal peptide synthetase component F [Secondary metabolites biosynthesis, transport and catabolism]
      pfam00550
      Location:996 → 1058
      PP-binding; Phosphopantetheine attachment site
      pfam00668
      Location:19 → 313
      Condensation; Condensation domain
      pfam13745
      Location:334 → 427
      HxxPF_rpt; HxxPF-repeated domain
    Nucleotide Protein
    Heading Accession and Version

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