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    PA5088 hypothetical protein [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 882244, updated on 24-Aug-2024

    Summary

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    Gene symbol
    PA5088
    Gene description
    hypothetical protein
    Locus tag
    PA5088
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (5726357..5727238, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene transcriptional regulator Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene N-formylglutamate amidohydrolase Neighboring gene imidazolonepropionase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning, purification, crystallization and preliminary X-ray studies of the putative type VI secretion immunity protein Tli5 (PA5088) from Pseudomonas aeruginosa. Chen Z, et al. Acta Crystallogr F Struct Biol Commun, 2014 Jul. PMID 25005085, Free PMC Article
    2. Structural analysis of Pseudomonas aeruginosa H3-T6SS immunity proteins. Yang XY, et al. FEBS Lett, 2016 Aug. PMID 27397502
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    hypothetical protein
    NP_253775.1
    • 'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      5726357..5727238 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_253775.1 hypothetical protein PA5088 [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_253775.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5E5R1K0
      Conserved Domains (2) summary
      COG0790
      Location:15 → 288
      TPR; TPR repeat [Signal transduction mechanisms]
      sd00010
      Location:62 → 90
      SLR; SLR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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