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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001172121.1 → NP_001165592.1 RNA-binding motif, single-stranded-interacting protein 3 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) encodes the longest protein (isoform 4).
- Source sequence(s)
-
AC138313, AK046197, BE136226
- Consensus CDS
-
CCDS57712.1
- UniProtKB/TrEMBL
-
A0A6I8MX12
- Related
- ENSMUSP00000131371.3, ENSMUST00000164018.9
- Conserved Domains (2) summary
-
- cd12475
Location:183 → 270
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cl17169
Location:100 → 183
- RRM_SF; RNA recognition motif (RRM) superfamily
-
NM_001172122.1 → NP_001165593.1 RNA-binding motif, single-stranded-interacting protein 3 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) has multiple differences in the 5' UTR and in the coding region, compared to variant 4. The resulting protein (isoform 3) has multiple differences when it is compared to isoform 4.
- Source sequence(s)
-
AC138313, AK030609, AK041098, BE136226
- Consensus CDS
-
CCDS52955.1
- UniProtKB/Swiss-Prot
-
Q8BWL5
- Related
- ENSMUSP00000107402.4, ENSMUST00000111772.10
- Conserved Domains (2) summary
-
- cd12475
Location:134 → 221
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cl17169
Location:51 → 134
- RRM_SF; RNA recognition motif (RRM) superfamily
-
NM_001172123.1 → NP_001165594.1 RNA-binding motif, single-stranded-interacting protein 3 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) uses different segments for its 5' UTR and 5' coding region, and contains an alternate exon in its 3' coding region, compared to variant 4. The resulting protein (isoform 1) has multiple differences when it is compared to isoform 4.
- Source sequence(s)
-
AC138313, AK041098, AK052196, BE136226
- Consensus CDS
-
CCDS52957.1
- UniProtKB/Swiss-Prot
- Q2VPR0, Q8BL73, Q8BLW6, Q8BMA7, Q8BMB5, Q8BML0, Q8BMN1, Q8BWL5
- Related
- ENSMUSP00000107403.4, ENSMUST00000111773.10
- Conserved Domains (2) summary
-
- cd12475
Location:134 → 221
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cl17169
Location:51 → 134
- RRM_SF; RNA recognition motif (RRM) superfamily
-
NM_001172124.1 → NP_001165595.1 RNA-binding motif, single-stranded-interacting protein 3 isoform 5
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) has multiple differences in the 5' UTR and in the coding region, one of which changes the reading frame, compared to variant 4. The resulting protein (isoform 5) has multiple differences including a distinct and shorter C-terminus when it is compared to isoform 4.
- Source sequence(s)
-
AC138313, AK033005, AK041098, BE136226
- Consensus CDS
-
CCDS52956.1
- UniProtKB/Swiss-Prot
-
Q8BWL5
- Related
- ENSMUSP00000133621.2, ENSMUST00000174868.8
- Conserved Domains (2) summary
-
- cd12472
Location:52 → 131
- RRM1_RBMS3; RNA recognition motif 1 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cd12475
Location:134 → 221
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
-
NM_001172126.1 → NP_001165597.1 RNA-binding motif, single-stranded-interacting protein 3 isoform 6
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) has multiple differences in the 5' UTR and in the coding region, one of which changes the reading frame, compared to variant 4. The resulting protein (isoform 6) has multiple differences including a distinct and shorter C-terminus when it is compared to isoform 4.
- Source sequence(s)
-
AC138313, AK041098, BE136226
- Consensus CDS
-
CCDS57711.1
- UniProtKB/TrEMBL
-
Q8BKJ2
- Related
- ENSMUSP00000039706.8, ENSMUST00000044901.14
- Conserved Domains (2) summary
-
- cd12472
Location:52 → 131
- RRM1_RBMS3; RNA recognition motif 1 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cd12475
Location:134 → 221
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
-
NM_178660.4 → NP_848775.2 RNA-binding motif, single-stranded-interacting protein 3 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses different segments for its 5' UTR and 5' coding region, compared to variant 4. The resulting protein (isoform 3) has a shorter and distinct N-terminus when it is compared to isoform 4.
- Source sequence(s)
-
AC138313, AK030478, AK041098, BC108402, BE136226
- Consensus CDS
-
CCDS40798.1
- UniProtKB/Swiss-Prot
-
Q8BWL5
- Related
- ENSMUSP00000066735.8, ENSMUST00000068962.14
- Conserved Domains (2) summary
-
- cd12475
Location:134 → 221
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cl17169
Location:51 → 134
- RRM_SF; RNA recognition motif (RRM) superfamily
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000075.7 Reference GRCm39 C57BL/6J
- Range
-
116401814..117869900 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036154757.1 → XP_036010650.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X1
- Conserved Domains (2) summary
-
- cd12475
Location:151 → 238
- RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cd12472
Location:69 → 148
- RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
-
XM_017313253.2 → XP_017168742.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X5
- UniProtKB/TrEMBL
-
Q8BKJ2
- Conserved Domains (2) summary
-
- cd12475
Location:134 → 221
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cl17169
Location:51 → 134
- RRM_SF; RNA recognition motif (RRM) superfamily
-
XM_017313252.2 → XP_017168741.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X4
- UniProtKB/TrEMBL
-
Q8BKJ2
- Conserved Domains (3) summary
-
- TIGR01645
Location:78 → 367
- half-pint; poly-U binding splicing factor, half-pint family
- cd12475
Location:134 → 221
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cl17169
Location:51 → 134
- RRM_SF; RNA recognition motif (RRM) superfamily
-
XM_017313251.3 → XP_017168740.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X3
- Conserved Domains (2) summary
-
- cd12475
Location:134 → 221
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cl17169
Location:51 → 134
- RRM_SF; RNA recognition motif (RRM) superfamily
-
XM_030244162.2 → XP_030100022.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X6
- Conserved Domains (2) summary
-
- cd12475
Location:100 → 187
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cl17169
Location:17 → 100
- RRM_SF; RNA recognition motif (RRM) superfamily
-
XM_036154758.1 → XP_036010651.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X2
- Conserved Domains (2) summary
-
- pfam07496
Location:14 → 62
- zf-CW; CW-type Zinc Finger
- cl02554
Location:82 → 155
- PWWP; The PWWP domain, named for a conserved Pro-Trp-Trp-Pro motif, is a small domain consisting of 100-150 amino acids. The PWWP domain is found in numerous proteins that are involved in cell division, growth and differentiation. Most PWWP-domain proteins ...