U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    bluR DNA-binding transcriptional repressor BluR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945735, updated on 17-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    bluR
    Official Full Name
    DNA-binding transcriptional repressor BluR
    Primary source
    ECOCYC:G6602
    Locus tag
    b1162
    See related
    ASAP:ABE-0003900
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1149; ycgE
    Summary
    YcgE has a MerR-like HTH DNA binding domain. [More information is available at EcoGene: EG13886].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (1213328..1214059, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein YmgL Neighboring gene DUF1398 domain-containing protein YcgX Neighboring gene blue light- and temperature-regulated antirepressor BluF Neighboring gene putative two-component system connector protein YcgZ

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genetic dissection of signaling through the Rcs phosphorelay. Majdalani N, et al. Methods Enzymol, 2007. PMID 17609140
    2. Genome-wide identification of H-NS-controlled, temperature-regulated genes in Escherichia coli K-12. White-Ziegler CA, et al. J Bacteriol, 2009 Feb. PMID 19011022, Free PMC Article
    3. RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation. Gama-Castro S, et al. Nucleic Acids Res, 2008 Jan. PMID 18158297, Free PMC Article
    4. 5-Fluorouracil reduces biofilm formation in Escherichia coli K-12 through global regulator AriR as an antivirulence compound. Attila C, et al. Appl Microbiol Biotechnol, 2009 Mar. PMID 19172264
    5. Combined inactivation of lon and ycgE decreases multidrug susceptibility by reducing the amount of OmpF porin in Escherichia coli. Duval V, et al. Antimicrob Agents Chemother, 2009 Nov. PMID 19721064, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables DNA-binding transcription factor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    DNA-binding transcriptional repressor BluR

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1213328..1214059 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415680.1 DNA-binding transcriptional repressor BluR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415680.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6M9QQC6
      Conserved Domains (1) summary
      PRK15043
      Location:1 → 239
      PRK15043; HTH-type transcriptional regulator MlrA
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.