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    ECs_0229 type VI secretion protein [ Escherichia coli O157:H7 str. Sakai ]

    Gene ID: 914124, updated on 6-Aug-2024

    Summary

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    Gene symbol
    ECs_0229
    Gene description
    type VI secretion protein
    Locus tag
    ECs_0229
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli O157:H7 str. Sakai (strain: Sakai, substrain: RIMD 0509952, serovar: O157:H7)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
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    Genomic context

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    Sequence:
    NC_002695.2 (258878..260728, complement)

    NC_002695.2Genomic Context describing neighboring genes Neighboring gene type VI secretion system protein ImpJ Neighboring gene lipoprotein Neighboring gene type VI secretion system protein ImpI Neighboring gene type VI secretion system protein ImpH Neighboring gene type VI secretion protein Neighboring gene type VI secretion system protein ImpC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002695.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655. Ohnishi M, et al. Syst Appl Microbiol, 2000 Oct. PMID 11108008
    2. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Makino K, et al. Genes Genet Syst, 1999 Oct. PMID 10734605
    3. Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak. Yokoyama K, et al. Gene, 2000 Nov 27. PMID 11111050
    4. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. Hayashi T, et al. DNA Res, 2001 Feb 28. PMID 11258796

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type VI secretion protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002695.2 Reference assembly

      Range
      258878..260728 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_308256.1 type VI secretion protein [Escherichia coli O157:H7 str. Sakai]

      See identical proteins and their annotated locations for NP_308256.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1C9CJE7
      Conserved Domains (1) summary
      COG3519
      Location:12 → 616
      COG3519; Type VI protein secretion system component VasA [Intracellular trafficking, secretion, and vesicular transport]
    Nucleotide Protein
    Heading Accession and Version

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