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    stfQ putative prophage side tail fiber protein StfQ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946098, updated on 3-Dec-2024

    Summary

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    Official Symbol
    stfQ
    Official Full Name
    putative prophage side tail fiber protein StfQ
    Primary source
    ECOCYC:G6821
    Locus tag
    b1547
    See related
    ASAP:ABE-0005168
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1540; ydfN
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    Genomic context

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    Sequence:
    NC_000913.3 (1634885..1635847, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative recombinase PinQ Neighboring gene putative tail fiber assembly protein TfaQ Neighboring gene putative prophage DNA-packaging protein NohA Neighboring gene DUF3950 domain-containing protein YnfO Neighboring gene DUF1398 domain-containing protein YdfO

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    2. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative prophage side tail fiber protein StfQ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1634885..1635847 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416065.1 putative prophage side tail fiber protein StfQ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416065.1

      Status: PROVISIONAL

      Conserved Domains (1) summary
      pfam07484
      Location:94 → 141
      Collar; Phage Tail Collar Domain
    Nucleotide Protein
    Heading Accession and Version

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