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    essQ putative prophage lysis protein EssQ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946093, updated on 3-Dec-2024

    Summary

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    Official Symbol
    essQ
    Official Full Name
    putative prophage lysis protein EssQ
    Primary source
    ECOCYC:G6829
    Locus tag
    b1556
    See related
    ASAP:ABE-0005197
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1550; ydfS
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    Genomic context

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    Sequence:
    NC_000913.3 (1640370..1640585, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF2514 domain-containing protein RzpQ Neighboring gene putative lipoprotein RzoQ Neighboring gene putative lysozyme Neighboring gene protein YdfR Neighboring gene putative zinc-binding protein YnfU Neighboring gene cold shock-like protein CspB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
    2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    3. TCDB: the Transporter Classification Database for membrane transport protein analyses and information. Saier MH Jr, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381841, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables pore-forming activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in killing of cells of another organism IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in symbiont-mediated killing of host cell IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative prophage lysis protein EssQ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1640370..1640585 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416074.4 putative prophage lysis protein EssQ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416074.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1IYB1, A0A376VJ22
      Conserved Domains (1) summary
      pfam04971
      Location:5 → 68
      Phage_holin_2_1; Bacteriophage P21 holin S
    Nucleotide Protein
    Heading Accession and Version

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