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    ECs_0605 type IV secretion protein Rhs [ Escherichia coli O157:H7 str. Sakai ]

    Gene ID: 916963, updated on 17-Dec-2024

    Summary

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    Gene symbol
    ECs_0605
    Gene description
    type IV secretion protein Rhs
    Locus tag
    ECs_0605
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli O157:H7 str. Sakai (strain: Sakai, substrain: RIMD 0509952, serovar: O157:H7)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
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    Genomic context

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    Sequence:
    NC_002695.2 (668129..672979, complement)

    NC_002695.2Genomic Context describing neighboring genes Neighboring gene type IV secretion protein Rhs Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene type VI secretion system Vgr family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002695.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655. Ohnishi M, et al. Syst Appl Microbiol, 2000 Oct. PMID 11108008
    2. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Makino K, et al. Genes Genet Syst, 1999 Oct. PMID 10734605
    3. Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak. Yokoyama K, et al. Gene, 2000 Nov 27. PMID 11111050
    4. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. Hayashi T, et al. DNA Res, 2001 Feb 28. PMID 11258796

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type IV secretion protein Rhs

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002695.2 Reference assembly

      Range
      668129..672979 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_308632.1 type IV secretion protein Rhs [Escherichia coli O157:H7 str. Sakai]

      See identical proteins and their annotated locations for NP_308632.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A7D7F1H1
      Conserved Domains (4) summary
      COG3209
      Location:716 → 1616
      RhsA; Uncharacterized conserved protein RhsA, contains 28 RHS repeats [General function prediction only]
      cd14742
      Location:252 → 305
      PAAR_RHS; proline-alanine-alanine-arginine (PAAR) domain, also containing C-terminal Rearrangement hotspot (Rhs) extensions
      TIGR01643
      Location:670 → 711
      YD_repeat_2x; YD repeat (two copies)
      pfam05593
      Location:609 → 644
      RHS_repeat; RHS Repeat
    Nucleotide Protein
    Heading Accession and Version

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