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    ykgJ putative metal-chelating domain-containing protein YkgJ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945905, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ykgJ
    Official Full Name
    putative metal-chelating domain-containing protein YkgJ
    Primary source
    ECOCYC:G6159
    Locus tag
    b0288
    See related
    ASAP:ABE-0000997
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0287
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    Genomic context

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    Sequence:
    NC_000913.3 (303853..304182, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene aldehyde dehydrogenase, FAD-binding subunit Neighboring gene aldehyde dehydrogenase, Fe-S subunit Neighboring gene DUF1440 domain-containing inner membrane protein YagU Neighboring gene putative fimbrial chaperone EcpE Neighboring gene fimbrial adhesin EcpD Neighboring gene putative fimbrial usher protein EcpC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables iron-sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative metal-chelating domain-containing protein YkgJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      303853..304182 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414822.1 putative metal-chelating domain-containing protein YkgJ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414822.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7EG30
      Conserved Domains (1) summary
      COG0727
      Location:1 → 109
      YkgJ; Fe-S-cluster containining protein [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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