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    pslD biofilm formation protein PslD [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 878051, updated on 14-Nov-2024

    Summary

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    Gene symbol
    pslD
    Gene description
    biofilm formation protein PslD
    Locus tag
    PA2234
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (2457510..2458280)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene biofilm formation protein PslA Neighboring gene biofilm formation protein PslB Neighboring gene biofilm formation protein PslC Neighboring gene biofilm formation protein PslE Neighboring gene biofilm formation protein PslF Neighboring gene biofilm formation protein PslG

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Psl trails guide exploration and microcolony formation in Pseudomonas aeruginosa biofilms. Zhao K, et al. Nature, 2013 May 16. PMID 23657259, Free PMC Article
    2. PslD is a secreted protein required for biofilm formation by Pseudomonas aeruginosa. Campisano A, et al. Appl Environ Microbiol, 2006 Apr. PMID 16598021, Free PMC Article
    3. Genetic and biochemical analyses of the Pseudomonas aeruginosa Psl exopolysaccharide reveal overlapping roles for polysaccharide synthesis enzymes in Psl and LPS production. Byrd MS, et al. Mol Microbiol, 2009 Aug. PMID 19659934, Free PMC Article
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within polysaccharide biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within single-species biofilm formation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within single-species biofilm formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in slime layer IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    biofilm formation protein PslD
    NP_250924.1
    • class 1: Function experimentally demonstrated in P. aeruginosa

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      2457510..2458280
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_250924.1 biofilm formation protein PslD [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_250924.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0C7CUK5
      Conserved Domains (1) summary
      COG1596
      Location:17 → 253
      Wza; Periplasmic protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold [Cell wall/membrane/envelope biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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