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    rpoB DNA-directed RNA polymerase subunit beta [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 881699, updated on 11-Sep-2024

    Summary

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    Gene symbol
    rpoB
    Gene description
    DNA-directed RNA polymerase subunit beta
    Locus tag
    PA4270
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (4776544..4780617, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene 30S ribosomal protein S12 Neighboring gene DNA-directed RNA polymerase subunit beta' Neighboring gene ncRNA Neighboring gene 50S ribosomal protein L7/L12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The primary structure of Escherichia coli RNA polymerase. Nucleotide sequence of the rpoB gene and amino-acid sequence of the beta-subunit. Ovchinnikov YA, et al. Eur J Biochem, 1981 Jun 1. PMID 6266829
    2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
    5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-directed RNA polymerase subunit beta
    NP_252960.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      4776544..4780617 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_252960.1 DNA-directed RNA polymerase subunit beta [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_252960.1

      Status: PROVISIONAL

      Conserved Domains (1) summary
      PRK00405
      Location:1 → 1357
      rpoB; DNA-directed RNA polymerase subunit beta; Reviewed
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q51561.2

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