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    Cofactor-independent phosphoglycerate mutase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822862, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Cofactor-independent phosphoglycerate mutase
    Primary source
    TAIR:AT3G30841
    Locus tag
    AT3G30841
    See related
    Araport:AT3G30841
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MJI6.21
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (12591378..12593551)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene pleiotropic drug resistance 10 Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001339061.1
    NM_180320.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Cofactor-independent phosphoglycerate mutase
    NP_850651.1
    • Cofactor-independent phosphoglycerate mutase; FUNCTIONS IN: catalytic activity, metal ion binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cofactor-independent phosphoglycerate mutase, archaeal (InterPro:IPR004456), Metalloenzyme (InterPro:IPR006124), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (InterPro:IPR019304); BEST Arabidopsis thaliana protein match is: Cofactor-independent phosphoglycerate mutase (TAIR:AT4G09520.1); Has 887 Blast hits to 887 proteins in 338 species: Archae - 293; Bacteria - 440; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      12591378..12593551
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180320.2 → NP_850651.1  Cofactor-independent phosphoglycerate mutase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850651.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VH93, A0A384LE61, A0A5S9XHD4, Q9LHK9
      Conserved Domains (1) summary
      cd16011
      Location:10 → 491
      iPGM_like; uncharacterized subfamily of alkaline phosphatase, homologous to 2 3 bisphosphoglycerate independent phosphoglycerate mutase (iPGM) and bacterial phosphopentomutases

    2. NM_001339061.1 → NP_001326838.1  Cofactor-independent phosphoglycerate mutase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VH93, A0A384LE61, A0A5S9XHD4, Q9LHK9
      Conserved Domains (1) summary
      cd16011
      Location:10 → 491
      iPGM_like; uncharacterized subfamily of alkaline phosphatase, homologous to 2 3 bisphosphoglycerate independent phosphoglycerate mutase (iPGM) and bacterial phosphopentomutases
    Nucleotide Protein
    Heading Accession and Version

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