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    Mpst mercaptopyruvate sulfurtransferase [ Rattus norvegicus (Norway rat) ]

    Gene ID: 192172, updated on 9-Dec-2024

    Summary

    Symbol
    Mpstprovided by RGD
    Full Name
    mercaptopyruvate sulfurtransferaseprovided by RGD
    Primary source
    RGD:620065
    See related
    EnsemblRapid:ENSRNOG00000000185 AllianceGenome:RGD:620065
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Mst
    Summary
    Enables identical protein binding activity and thiosulfate sulfurtransferase activity. Involved in several processes, including liver development; spinal cord development; and transsulfuration. Located in mitochondrion. Biomarker of type 2 diabetes mellitus. Orthologous to human MPST (mercaptopyruvate sulfurtransferase). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 572.5), Liver (RPKM 385.4) and 9 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Mpst in Genome Data Viewer
    Location:
    7q34
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (111836079..111843651)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (109955581..109963155)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (119626636..119631317)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene ciliary microtubule inner protein 4 Neighboring gene uncharacterized LOC120093821 Neighboring gene thiosulfate sulfurtransferase Neighboring gene uncharacterized LOC120093822 Neighboring gene potassium channel tetramerization domain containing 17 Neighboring gene transmembrane serine protease 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables 3-mercaptopyruvate sulfurtransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables 3-mercaptopyruvate sulfurtransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables identical protein binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables thiosulfate sulfurtransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables thiosulfate sulfurtransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in hydrogen sulfide biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in hydrogen sulfide biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in kidney development IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in liver development IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in spinal cord development IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in transsulfuration IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in neuron projection ISO
    Inferred from Sequence Orthology
    more info
     
    located_in neuron projection ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    3-mercaptopyruvate sulfurtransferase
    NP_620198.1
    XP_038934288.1
    XP_063119029.1
    XP_063119030.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_138843.2NP_620198.1  3-mercaptopyruvate sulfurtransferase

      See identical proteins and their annotated locations for NP_620198.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000007
      UniProtKB/Swiss-Prot
      P97532
      UniProtKB/TrEMBL
      A6HSJ8
      Related
      ENSRNOP00000000201.2, ENSRNOT00000000201.7
      Conserved Domains (1) summary
      COG2897
      Location:1279
      SseA; 3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains [Inorganic ion transport and metabolism]

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      111836079..111843651
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039078360.2XP_038934288.1  3-mercaptopyruvate sulfurtransferase isoform X2

      UniProtKB/TrEMBL
      A6HSJ9
      Conserved Domains (1) summary
      cd01448
      Location:10139
      TST_Repeat_1; Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it ...
    2. XM_063262959.1XP_063119029.1  3-mercaptopyruvate sulfurtransferase isoform X1

      UniProtKB/Swiss-Prot
      P97532
      UniProtKB/TrEMBL
      A6HSJ8
    3. XM_063262960.1XP_063119030.1  3-mercaptopyruvate sulfurtransferase isoform X1

      UniProtKB/Swiss-Prot
      P97532
      UniProtKB/TrEMBL
      A6HSJ8