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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856780, updated on 9-Dec-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000007523
    Locus tag
    YER053C-A
    See related
    AllianceGenome:SGD:S000007523; FungiDB:YER053C-A; VEuPathDB:YER053C-A
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in endoplasmic reticulum. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_001137.3 (260933..261046, complement)

    Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene aspartate kinase Neighboring gene Cu/Pi carrier Neighboring gene Gip2p Neighboring gene ATP phosphoribosyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001137.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The nucleotide sequence of Saccharomyces cerevisiae chromosome V. Dietrich FS, et al. Nature, 1997 May 29. PMID 9169868, Free PMC Article
    2. Interdependent action of KH domain proteins Krr1 and Dim2 drive the 40S platform assembly. Sturm M, et al. Nat Commun, 2017 Dec 20. PMID 29263326, Free PMC Article
    3. Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Tkach JM, et al. Nat Cell Biol, 2012 Sep. PMID 22842922, Free PMC Article
    4. Target selection by natural and redesigned PUF proteins. Porter DF, et al. Proc Natl Acad Sci U S A, 2015 Dec 29. PMID 26668354, Free PMC Article
    5. Global analysis of protein localization in budding yeast. Huh WK, et al. Nature, 2003 Oct 16. PMID 14562095

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_061492.1
    • hypothetical protein; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; protein abundance increases in response to DNA replication stress

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001137.3 Reference assembly

      Range
      260933..261046 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184444.1 → NP_061492.1  TPA: uncharacterized protein YER053C-A [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_061492.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DLV6, Q3E7B0
      UniProtKB/TrEMBL
      A6ZR05, B3LS67, C7GSK3, C8Z758, G2WCT9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3E7B0.1

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