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    Tmem19 transmembrane protein 19 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 299800, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tmem19provided by RGD
    Official Full Name
    transmembrane protein 19provided by RGD
    Primary source
    RGD:735209
    See related
    EnsemblRapid:ENSRNOG00000003985 AllianceGenome:RGD:735209
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be active in membrane. Orthologous to human TMEM19 (transmembrane protein 19). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Liver (RPKM 75.3), Adrenal (RPKM 52.1) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Tmem19 in Genome Data Viewer
    Location:
    7q22
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (52844985..52871708, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (50958884..50985601, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (58316583..58343761, complement)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family, member 15 Neighboring gene uncharacterized LOC134479691 Neighboring gene RAB21, member RAS oncogene family Neighboring gene THAP domain containing 2 Neighboring gene small nucleolar RNA SNORA44 Neighboring gene zinc finger, C3H1-type containing

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199098.2NP_954529.2  transmembrane protein 19

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000007
      UniProtKB/Swiss-Prot
      Q6P726
      UniProtKB/TrEMBL
      A0A0G2K7B8, A6IGK6, A6IGK7
      Related
      ENSRNOP00000074140.2, ENSRNOT00000090560.3
      Conserved Domains (1) summary
      pfam01940
      Location:68322
      DUF92; Integral membrane protein DUF92

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      52844985..52871708 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006241347.5XP_006241409.1  transmembrane protein 19 isoform X1

      UniProtKB/Swiss-Prot
      Q6P726
      UniProtKB/TrEMBL
      A0A0H2UHC5, A6IGK6
      Related
      ENSRNOP00000005310.6, ENSRNOT00000005310.6
      Conserved Domains (1) summary
      pfam01940
      Location:82334
      DUF92; Integral membrane protein DUF92
    2. XM_006241348.5XP_006241410.1  transmembrane protein 19 isoform X2

      See identical proteins and their annotated locations for XP_006241410.1

      UniProtKB/Swiss-Prot
      Q6P726
      UniProtKB/TrEMBL
      A0A0G2K7B8, A6IGK6, A6IGK7
      Conserved Domains (1) summary
      pfam01940
      Location:68322
      DUF92; Integral membrane protein DUF92