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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001009686.2 → NP_001009686.1 DDB1- and CUL4-associated factor 11
See identical proteins and their annotated locations for NP_001009686.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) is the protein-coding variant.
- Source sequence(s)
-
BC091364
- UniProtKB/Swiss-Prot
-
Q5M9G8
- UniProtKB/TrEMBL
- A0A8L2QQZ0, A6KH09
- Conserved Domains (2) summary
-
- sd00039
Location:221 → 263
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:180 → 511
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
RNA
-
NR_073087.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate 5' exon structure compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
JAXUCZ010000015
-
NR_073088.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate 5' and internal exon structure compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
JAXUCZ010000015
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086033.1 Reference GRCr8
- Range
-
33015370..33027407
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017599685.3 → XP_017455174.1 DDB1- and CUL4-associated factor 11 isoform X1
- UniProtKB/Swiss-Prot
-
Q5M9G8
- UniProtKB/TrEMBL
- A0A8L2QQZ0, A6KH09
- Conserved Domains (2) summary
-
- sd00039
Location:221 → 263
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:180 → 511
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_063274253.1 → XP_063130323.1 DDB1- and CUL4-associated factor 11 isoform X2
- UniProtKB/TrEMBL
- A0A8L2QQZ0, A6KH10
-
XM_006251971.5 → XP_006252033.1 DDB1- and CUL4-associated factor 11 isoform X1
See identical proteins and their annotated locations for XP_006252033.1
- UniProtKB/Swiss-Prot
-
Q5M9G8
- UniProtKB/TrEMBL
- A0A8L2QQZ0, A6KH09
- Related
- ENSRNOP00000074435.1, ENSRNOT00000077584.3
- Conserved Domains (2) summary
-
- sd00039
Location:221 → 263
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:180 → 511
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_039093298.2 → XP_038949226.1 DDB1- and CUL4-associated factor 11 isoform X1
- UniProtKB/Swiss-Prot
-
Q5M9G8
- UniProtKB/TrEMBL
- A0A8L2QQZ0, A6KH09
- Conserved Domains (2) summary
-
- sd00039
Location:221 → 263
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:180 → 511
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_063274254.1 → XP_063130324.1 DDB1- and CUL4-associated factor 11 isoform X2
- UniProtKB/TrEMBL
- A0A8L2QQZ0, A6KH10
-
XM_039093299.2 → XP_038949227.1 DDB1- and CUL4-associated factor 11 isoform X1
- UniProtKB/Swiss-Prot
-
Q5M9G8
- UniProtKB/TrEMBL
- A0A8L2QQZ0, A6KH09
- Conserved Domains (2) summary
-
- sd00039
Location:221 → 263
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:180 → 511
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_063274255.1 → XP_063130325.1 DDB1- and CUL4-associated factor 11 isoform X2
- UniProtKB/TrEMBL
- A0A8L2QQZ0, A6KH10