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    Vis1 viral integration site 1 [ Mus musculus (house mouse) ]

    Gene ID: 110153, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Vis1provided by MGI
    Official Full Name
    viral integration site 1provided by MGI
    Primary source
    MGI:MGI:96091
    See related
    AllianceGenome:MGI:96091
    Gene type
    unknown
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    His1; His-1; Gm27276
    Expression
    Low expression observed in reference dataset See more

    Genomic context

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    See Vis1 in Genome Data Viewer
    Location:
    2 B; 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (45128955..45172925)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (45238980..45282913)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene zinc finger E-box binding homeobox 2 Neighboring gene microRNA 5129 Neighboring gene STARR-seq mESC enhancer starr_04403 Neighboring gene zinc finger E-box binding homeobox 2, opposite strand Neighboring gene STARR-positive B cell enhancer mm9_chr2:45049987-45050287 Neighboring gene STARR-seq mESC enhancer starr_04405 Neighboring gene STARR-seq mESC enhancer starr_04406 Neighboring gene VISTA enhancer mm1737 Neighboring gene STARR-seq mESC enhancer starr_04408 Neighboring gene STARR-seq mESC enhancer starr_04409 Neighboring gene STARR-seq mESC enhancer starr_04410 Neighboring gene predicted gene 13479 Neighboring gene predicted gene, 30728 Neighboring gene STARR-seq mESC enhancer starr_04411 Neighboring gene predicted gene, 30792

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Expression of the putative proto-oncogene His-1 in normal and neoplastic tissues. Li J, et al. Am J Pathol, 1997 Apr. PMID 9094986, Free PMC Article
    2. Evolutionary conservation of putative functional domains in the human homolog of the murine His-1 gene. Li J, et al. Gene, 1997 Jan 15. PMID 9031624
    3. Retroviral insertions in the murine His-1 locus activate the expression of a novel RNA that lacks an extensive open reading frame. Askew DS, et al. Mol Cell Biol, 1994 Mar. PMID 8114708, Free PMC Article
    4. His-1 and His-2: identification and chromosomal mapping of two commonly rearranged sites of viral integration in a myeloid leukemia. Askew DS, et al. Oncogene, 1991 Nov. PMID 1682866
    5. Interspecific backcross mice show sex-specific differences in allelic inheritance. Siracusa LD, et al. Genetics, 1991 Aug. PMID 1916246, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • hematopoietic insertion site 1

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      45128955..45172925
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004940929.1 RNA Sequence

    2. XR_004940931.1 RNA Sequence

    3. XR_004940930.1 RNA Sequence

    4. XR_004940932.1 RNA Sequence

    5. XR_374337.5 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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