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    STB6 Stb6p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 853790, updated on 9-Dec-2024

    Summary

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    Official Symbol
    STB6
    Official Full Name
    Stb6p
    Primary source
    SGD:S000001555
    Locus tag
    YKL072W
    See related
    AllianceGenome:SGD:S000001555; FungiDB:YKL072W; VEuPathDB:YKL072W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to be part of Sin3-type complex. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See STB6 in Genome Data Viewer
    Location:
    chromosome: XI
    Exon count:
    1
    Sequence:
    Chromosome: XI; NC_001143.9 (299582..301882)

    Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene Mud2p Neighboring gene Hsp70 family chaperone LHS1 Neighboring gene tRNA-Trp Neighboring gene Osi1p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001143.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of the Saccharomyces cerevisiae genes STB1-STB5 encoding Sin3p binding proteins. Kasten MM, et al. Mol Gen Genet, 1997 Oct. PMID 9393435
    2. Vps68 cooperates with ESCRT-III in intraluminal vesicle formation. Alsleben S, et al. J Cell Sci, 2022 May 15. PMID 35445263
    3. Genetic basis for Saccharomyces cerevisiae biofilm in liquid medium. Scherz K, et al. G3 (Bethesda), 2014 Jul 9. PMID 25009170, Free PMC Article
    4. Complete DNA sequence of yeast chromosome XI. Dujon B, et al. Nature, 1994 Jun 2. PMID 8196765
    5. Epistatic relationships reveal the functional organization of yeast transcription factors. Zheng J, et al. Mol Syst Biol, 2010 Oct 5. PMID 20959818, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    part_of Sin3-type complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Stb6p
    NP_012851.1
    • Protein that binds Sin3p in a two-hybrid assay; STB6 has a paralog, STB2, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001143.9 Reference assembly

      Range
      299582..301882
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179638.1 → NP_012851.1  TPA: Stb6p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012851.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VXL4, P36085
      UniProtKB/TrEMBL
      A6ZZP3, B3LR18, C7GVN5, N1P0J8
      Conserved Domains (1) summary
      pfam08598
      Location:601 → 687
      Sds3; Sds3-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P36085.1

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