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    Ceacam15l1 CEA cell adhesion molecule 15 like 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 102550403, updated on 27-Dec-2024

    Summary

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    Official Symbol
    Ceacam15l1provided by RGD
    Official Full Name
    CEA cell adhesion molecule 15 like 1provided by RGD
    Primary source
    RGD:7714566
    See related
    AllianceGenome:RGD:7714566
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Ceacam15
    Summary
    Predicted to be involved in T cell activation and immune response. Predicted to be active in external side of plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 4.5), Adrenal (RPKM 1.9) and 5 other tissues See more
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    Genomic context

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    See Ceacam15l1 in Genome Data Viewer
    Location:
    1q21
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (86482477..86488170, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (77354364..77356099, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (78607582..78610703, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene neuronal PAS domain protein 1 Neighboring gene Rho GTPase activating protein 35 Neighboring gene G protein subunit gamma 5, pseudogene 3 Neighboring gene CEA cell adhesion molecule 15 Neighboring gene CEA cell adhesion molecule 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    involved_in T cell activation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in external side of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    carcinoembryonic antigen-related cell adhesion molecule 15-like
    Names
    carcinoembryonic antigen-related cell adhesion molecule 3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      86482477..86488170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008759033.3 → XP_008757255.3  carcinoembryonic antigen-related cell adhesion molecule 15-like

      UniProtKB/TrEMBL
      A0A8I6AIL4
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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