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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001204906.2 → NP_001191835.1 ATP-dependent DNA helicase Q1 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 3' UTR and uses an alternate splice site in the 3' coding region, compared to variant 1. The encoded isoform (2) is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC102125, AC142413
- Consensus CDS
-
CCDS57466.1
- UniProtKB/TrEMBL
- E9Q3N0, Q3UFL0
- Related
- ENSMUSP00000098394.4, ENSMUST00000100832.10
- Conserved Domains (5) summary
-
- TIGR00614
Location:81 → 543
- recQ_fam; ATP-dependent DNA helicase, RecQ family
- cd00079
Location:285 → 417
- HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
- pfam00270
Location:93 → 268
- DEAD; DEAD/DEAH box helicase
- pfam16124
Location:422 → 478
- RecQ_Zn_bind; RecQ zinc-binding
- cl09632
Location:484 → 576
- RQC; RQC domain
-
NM_001204907.2 → NP_001191836.1 ATP-dependent DNA helicase Q1 isoform 3
See identical proteins and their annotated locations for NP_001191836.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 3' UTR and uses an alternate splice site in the 3' coding region, compared to variant 1. The encoded isoform (3) is shorter and has a distinct C-terminus, compared to isoform 1. Variants 3 and 9 both encode the same isoform (3).
- Source sequence(s)
-
AC102125, AC142413
- Consensus CDS
-
CCDS57465.1
- UniProtKB/TrEMBL
- Q3UFL0, Q3UUK0
- Related
- ENSMUSP00000032370.7, ENSMUST00000032370.13
- Conserved Domains (1) summary
-
- TIGR00614
Location:81 → 543
- recQ_fam; ATP-dependent DNA helicase, RecQ family
-
NM_001355511.2 → NP_001342440.1 ATP-dependent DNA helicase Q1 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, compared to variant 1, and encodes isoform 1. Variants 1 and 4 encode the same protein (isoform 1).
- Source sequence(s)
-
AC102125, AC142413
- Consensus CDS
-
CCDS39695.1
- UniProtKB/Swiss-Prot
- Q3TPI5, Q9Z128, Q9Z129
- UniProtKB/TrEMBL
-
Q91YU1
- Conserved Domains (1) summary
-
- TIGR00614
Location:81 → 543
- recQ_fam; ATP-dependent DNA helicase, RecQ family
-
NM_001410305.1 → NP_001397234.1 ATP-dependent DNA helicase Q1 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC102125, AC142413
- UniProtKB/Swiss-Prot
- Q3TPI5, Q9Z128, Q9Z129
- UniProtKB/TrEMBL
-
Q91YU1
-
NM_001410306.1 → NP_001397235.1 ATP-dependent DNA helicase Q1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC102125, AC142413
- UniProtKB/TrEMBL
-
Q3UFL0
-
NM_001410307.1 → NP_001397236.1 ATP-dependent DNA helicase Q1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC102125, AC142413
- UniProtKB/TrEMBL
-
Q3UFL0
-
NM_001410308.1 → NP_001397237.1 ATP-dependent DNA helicase Q1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC102125, AC142413
- UniProtKB/TrEMBL
-
Q3UFL0
-
NM_001410309.1 → NP_001397238.1 ATP-dependent DNA helicase Q1 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC102125, AC142413
- UniProtKB/TrEMBL
- Q3UFL0, Q3UUK0
-
NM_023042.4 → NP_075529.2 ATP-dependent DNA helicase Q1 isoform 1
See identical proteins and their annotated locations for NP_075529.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1). Variants 1, 4, and 5 all encode the same isoform (1).
- Source sequence(s)
-
AC102125, AC142413
- Consensus CDS
-
CCDS39695.1
- UniProtKB/Swiss-Prot
- Q3TPI5, Q9Z128, Q9Z129
- UniProtKB/TrEMBL
-
Q91YU1
- Related
- ENSMUSP00000107434.3, ENSMUST00000111803.9
- Conserved Domains (1) summary
-
- TIGR00614
Location:81 → 543
- recQ_fam; ATP-dependent DNA helicase, RecQ family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000072.7 Reference GRCm39 C57BL/6J
- Range
-
142296068..142332802 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)