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    Bcl2a1a B cell leukemia/lymphoma 2 related protein A1a [ Mus musculus (house mouse) ]

    Gene ID: 12044, updated on 27-Nov-2024

    Summary

    Official Symbol
    Bcl2a1aprovided by MGI
    Official Full Name
    B cell leukemia/lymphoma 2 related protein A1aprovided by MGI
    Primary source
    MGI:MGI:102687
    See related
    Ensembl:ENSMUSG00000102037 AllianceGenome:MGI:102687
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    A1; Bfl-1; Hbpa1; Bcl2a1
    Summary
    Predicted to enable BH domain binding activity and channel activity. Involved in negative regulation of apoptotic process. Acts upstream of or within B cell homeostasis and negative regulation of B cell apoptotic process. Predicted to be located in cytoplasm. Predicted to be active in mitochondrial outer membrane. Is expressed in several structures, including bone; central nervous system; heart; hemolymphoid system; and respiratory system. Orthologous to human BCL2A1 (BCL2 related protein A1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in spleen adult (RPKM 7.1), thymus adult (RPKM 4.6) and 13 other tissues See more
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    Genomic context

    See Bcl2a1a in Genome Data Viewer
    Location:
    9 E3.1; 9 47.24 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (88838973..88844469)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (88956920..88962416)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene 2396 Neighboring gene STARR-seq mESC enhancer starr_24864 Neighboring gene STARR-seq mESC enhancer starr_24865 Neighboring gene predicted gene, 23707 Neighboring gene predicted gene, 53510 Neighboring gene STARR-seq mESC enhancer starr_24866 Neighboring gene predicted gene, 51716 Neighboring gene predicted gene, 24463 Neighboring gene predicted gene, 57540

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (4)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables BH domain binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein-containing complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in mitochondrial outer membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    bcl-2-related protein A1
    Names
    A1-A
    hemopoietic-specific early response protein
    protein BFL-1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009742.3NP_033872.1  bcl-2-related protein A1

      See identical proteins and their annotated locations for NP_033872.1

      Status: VALIDATED

      Source sequence(s)
      CT030259
      Consensus CDS
      CCDS23391.1
      UniProtKB/Swiss-Prot
      Q07440
      UniProtKB/TrEMBL
      Q8K164
      Related
      ENSMUSP00000096086.3, ENSMUST00000098485.4
      Conserved Domains (1) summary
      smart00337
      Location:37140
      BCL; BCL (B-Cell lymphoma); contains BH1, BH2 regions

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      88838973..88844469
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)