U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CEP89 centrosomal protein 89 [ Gallus gallus (chicken) ]

    Gene ID: 415769, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Symbol
    CEP89provided by CGNC
    Full Name
    centrosomal protein 89provided by CGNC
    Primary source
    CGNC:3528
    See related
    Ensembl:ENSGALG00010024852
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    CCDC123
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CEP89 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (9600838..9627584, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (9945151..9971869, complement)

    Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene nudix hydrolase 19 Neighboring gene tudor domain containing 12 Neighboring gene solute carrier family 7 member 9 Neighboring gene Fanconi anemia core complex associated protein 24 Neighboring gene rhophilin Rho GTPase binding protein 2 Neighboring gene uncharacterized LOC121111705

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrion organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centriole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ciliary transition fiber IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    centrosomal protein of 89 kDa
    Names
    centrosomal protein 89kDa
    coiled-coil domain containing 123

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001389555.2 → NP_001376484.1  centrosomal protein of 89 kDa

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000248
      UniProtKB/TrEMBL
      A0A8V0ZV66
      Related
      ENSGALP00010037445.1, ENSGALT00010060686.1
      Conserved Domains (2) summary
      COG1196
      Location:379 → 741
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG5281
      Location:70 → 352
      COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      9600838..9627584 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040707070.2 → XP_040563004.1  centrosomal protein of 89 kDa isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZV66, A0A8V1A0C8
      Related
      ENSGALP00010037459.1, ENSGALT00010060699.1
      Conserved Domains (3) summary
      COG1196
      Location:379 → 741
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG5281
      Location:70 → 352
      COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]
      TIGR04211
      Location:247 → 355
      SH3_and_anchor; SH3 domain protein

    2. XM_040707068.2 → XP_040563002.1  centrosomal protein of 89 kDa isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZV66, A0A8V1A2M3
      Related
      ENSGALP00010037451.1, ENSGALT00010060692.1
      Conserved Domains (2) summary
      COG5281
      Location:70 → 352
      COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]
      TIGR02168
      Location:398 → 709
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    3. XM_040707073.2 → XP_040563007.1  centrosomal protein of 89 kDa isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZV66
      Conserved Domains (3) summary
      COG1196
      Location:280 → 642
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG5281
      Location:29 → 253
      COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]
      TIGR04211
      Location:148 → 256
      SH3_and_anchor; SH3 domain protein

    4. XM_040707074.2 → XP_040563008.1  centrosomal protein of 89 kDa isoform X5

      UniProtKB/TrEMBL
      A0A8V0ZV66
      Conserved Domains (2) summary
      COG1196
      Location:254 → 616
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR04211
      Location:122 → 230
      SH3_and_anchor; SH3 domain protein

    5. XM_040707072.2 → XP_040563006.1  centrosomal protein of 89 kDa isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZV66
      Conserved Domains (3) summary
      COG1196
      Location:280 → 642
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG5281
      Location:29 → 253
      COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]
      TIGR04211
      Location:148 → 256
      SH3_and_anchor; SH3 domain protein

    6. XM_040707071.2 → XP_040563005.1  centrosomal protein of 89 kDa isoform X3

      UniProtKB/TrEMBL
      A0A8V1A4T4
      Conserved Domains (2) summary
      COG1196
      Location:237 → 606
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG5281
      Location:70 → 352
      COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      9945151..9971869 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046925534.1 → XP_046781490.1  centrosomal protein of 89 kDa isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZV66

    2. XM_046925533.1 → XP_046781489.1  centrosomal protein of 89 kDa isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZV66

    3. XM_046925538.1 → XP_046781494.1  centrosomal protein of 89 kDa isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZV66

    4. XM_046925539.1 → XP_046781495.1  centrosomal protein of 89 kDa isoform X5

      UniProtKB/TrEMBL
      A0A8V0ZV66

    5. XM_046925536.1 → XP_046781492.1  centrosomal protein of 89 kDa isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZV66

    6. XM_046925537.1 → XP_046781493.1  centrosomal protein of 89 kDa isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZV66

    7. XM_046925535.1 → XP_046781491.1  centrosomal protein of 89 kDa isoform X3

      UniProtKB/TrEMBL
      A0A8V1A4T4
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.