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    AGGF1 angiogenic factor with G-patch and FHA domains 1 [ Gallus gallus (chicken) ]

    Gene ID: 416364, updated on 17-Aug-2024

    Summary

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    Symbol
    AGGF1provided by CGNC
    Full Name
    angiogenic factor with G-patch and FHA domains 1provided by CGNC
    Primary source
    CGNC:3170
    See related
    Ensembl:ENSGALG00010010457
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See AGGF1 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (23851987..23873073, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (23851987..23873073, complement)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 8B Neighboring gene uncharacterized LOC107051953 Neighboring gene small nucleolar RNA SNORA47 Neighboring gene corticotropin releasing hormone binding protein Neighboring gene S100 calcium binding protein Z

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    angiogenic factor with G patch and FHA domains 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      23851987..23873073 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_414679.8 → XP_414679.3  angiogenic factor with G patch and FHA domains 1 isoform X1

      UniProtKB/TrEMBL
      F1NWU4
      Related
      ENSGALP00010014201.1, ENSGALT00010024993.1
      Conserved Domains (5) summary
      COG1716
      Location:414 → 499
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      cd00060
      Location:397 → 503
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15188
      Location:19 → 67
      CCDC-167; Coiled-coil domain-containing protein 167
      cd16164
      Location:179 → 232
      OCRE_VG5Q; OCRE domain found in angiogenic factor VG5Q and similar proteins
      cl02611
      Location:607 → 648
      G-patch; G-patch domain

    2. XM_004937335.5 → XP_004937392.1  angiogenic factor with G patch and FHA domains 1 isoform X2

      Conserved Domains (5) summary
      COG1716
      Location:319 → 404
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      cd00060
      Location:302 → 408
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15188
      Location:19 → 67
      CCDC-167; Coiled-coil domain-containing protein 167
      cd16164
      Location:179 → 232
      OCRE_VG5Q; OCRE domain found in angiogenic factor VG5Q and similar proteins
      cl02611
      Location:512 → 553
      G-patch; G-patch domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      23851987..23873073 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046935641.1 → XP_046791597.1  angiogenic factor with G patch and FHA domains 1 isoform X1

      UniProtKB/TrEMBL
      F1NWU4

    2. XM_046935642.1 → XP_046791598.1  angiogenic factor with G patch and FHA domains 1 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

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