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    LUC7L3 LUC7 like 3 pre-mRNA splicing factor [ Gallus gallus (chicken) ]

    Gene ID: 428677, updated on 3-Dec-2024

    Summary

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    Symbol
    LUC7L3provided by CGNC
    Full Name
    LUC7 like 3 pre-mRNA splicing factorprovided by CGNC
    Primary source
    CGNC:53432
    See related
    Ensembl:ENSGALG00010029282
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See LUC7L3 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (10751990..10765261, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (10352383..10365667, complement)

    Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 Neighboring gene ankyrin repeat domain-containing protein 40-like Neighboring gene ankyrin repeat domain 40 Neighboring gene ATP binding cassette subfamily C member 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splice site recognition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U1 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U2-type prespliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    luc7-like protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031530.2 → NP_001026701.2  luc7-like protein 3

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000317
      UniProtKB/TrEMBL
      F1NXR8, Q5ZIU4
      Related
      ENSGALP00010043505.1, ENSGALT00010070814.1
      Conserved Domains (1) summary
      pfam03194
      Location:4 → 246
      LUC7; LUC7 N_terminus

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      10751990..10765261 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025141619.3 → XP_024997387.2  luc7-like protein 3 isoform X12

      UniProtKB/TrEMBL
      Q5ZIU4
      Conserved Domains (1) summary
      cl27291
      Location:4 → 244
      LUC7; LUC7 N_terminus

    2. XM_040649572.2 → XP_040505506.1  luc7-like protein 3 isoform X10

      UniProtKB/TrEMBL
      Q5ZIU4
      Conserved Domains (1) summary
      pfam03194
      Location:4 → 246
      LUC7; LUC7 N_terminus

    3. XM_015295411.4 → XP_015150897.1  luc7-like protein 3 isoform X6

      UniProtKB/TrEMBL
      Q5ZIU4
      Conserved Domains (2) summary
      COG5200
      Location:4 → 244
      LUC7; U1 snRNP component, mediates U1 snRNP association with cap-binding complex [RNA processing and modification]
      pfam03194
      Location:4 → 240
      LUC7; LUC7 N_terminus

    4. XM_015295413.4 → XP_015150899.2  luc7-like protein 3 isoform X8

      UniProtKB/TrEMBL
      Q5ZIU4
      Conserved Domains (1) summary
      cl27291
      Location:4 → 244
      LUC7; LUC7 N_terminus

    5. XM_015295410.4 → XP_015150896.1  luc7-like protein 3 isoform X5

      UniProtKB/TrEMBL
      A0A1D5P7P5, Q5ZIU4
      Related
      ENSGALP00010043506.1, ENSGALT00010070815.1
      Conserved Domains (1) summary
      pfam03194
      Location:4 → 246
      LUC7; LUC7 N_terminus

    6. XM_025141618.3 → XP_024997386.1  luc7-like protein 3 isoform X2

      UniProtKB/TrEMBL
      Q5ZIU4
      Conserved Domains (1) summary
      pfam03194
      Location:4 → 244
      LUC7; LUC7 N_terminus

    7. XM_040649573.2 → XP_040505507.1  luc7-like protein 3 isoform X11

      UniProtKB/TrEMBL
      Q5ZIU4
      Conserved Domains (1) summary
      cl27291
      Location:4 → 248
      LUC7; LUC7 N_terminus

    8. XM_040649571.2 → XP_040505505.1  luc7-like protein 3 isoform X9

      UniProtKB/TrEMBL
      Q5ZIU4
      Conserved Domains (1) summary
      pfam03194
      Location:4 → 250
      LUC7; LUC7 N_terminus

    9. XM_040649567.2 → XP_040505501.1  luc7-like protein 3 isoform X3

      UniProtKB/TrEMBL
      Q5ZIU4
      Conserved Domains (1) summary
      cl27291
      Location:4 → 248
      LUC7; LUC7 N_terminus

    10. XM_040649570.2 → XP_040505504.1  luc7-like protein 3 isoform X7

      UniProtKB/TrEMBL
      Q5ZIU4
      Conserved Domains (1) summary
      cl27291
      Location:4 → 248
      LUC7; LUC7 N_terminus

    11. XM_040649569.2 → XP_040505503.1  luc7-like protein 3 isoform X4

      UniProtKB/TrEMBL
      Q5ZIU4
      Conserved Domains (1) summary
      pfam03194
      Location:4 → 250
      LUC7; LUC7 N_terminus

    12. XM_040649568.2 → XP_040505502.1  luc7-like protein 3 isoform X4

      UniProtKB/TrEMBL
      Q5ZIU4
      Conserved Domains (1) summary
      pfam03194
      Location:4 → 250
      LUC7; LUC7 N_terminus

    13. XM_040649566.2 → XP_040505500.1  luc7-like protein 3 isoform X1

      UniProtKB/TrEMBL
      Q5ZIU4
      Conserved Domains (1) summary
      cl27291
      Location:4 → 248
      LUC7; LUC7 N_terminus

    14. XM_040649575.2 → XP_040505509.1  luc7-like protein 3 isoform X14

      Conserved Domains (1) summary
      pfam03194
      Location:4 → 246
      LUC7; LUC7 N_terminus

    15. XM_040649574.2 → XP_040505508.1  luc7-like protein 3 isoform X13

      Conserved Domains (1) summary
      pfam03194
      Location:4 → 250
      LUC7; LUC7 N_terminus

    RNA

    1. XR_005840608.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      10352383..10365667 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046929545.1 → XP_046785501.1  luc7-like protein 3 isoform X12

      UniProtKB/TrEMBL
      Q5ZIU4

    2. XM_046929543.1 → XP_046785499.1  luc7-like protein 3 isoform X10

      UniProtKB/TrEMBL
      Q5ZIU4

    3. XM_046929539.1 → XP_046785495.1  luc7-like protein 3 isoform X6

      UniProtKB/TrEMBL
      Q5ZIU4

    4. XM_046929541.1 → XP_046785497.1  luc7-like protein 3 isoform X8

      UniProtKB/TrEMBL
      Q5ZIU4

    5. XM_046929538.1 → XP_046785494.1  luc7-like protein 3 isoform X5

      UniProtKB/TrEMBL
      A0A1D5P7P5, Q5ZIU4

    6. XM_046929534.1 → XP_046785490.1  luc7-like protein 3 isoform X2

      UniProtKB/TrEMBL
      Q5ZIU4

    7. XM_046929544.1 → XP_046785500.1  luc7-like protein 3 isoform X11

      UniProtKB/TrEMBL
      Q5ZIU4

    8. XM_046929542.1 → XP_046785498.1  luc7-like protein 3 isoform X9

      UniProtKB/TrEMBL
      Q5ZIU4

    9. XM_046929535.1 → XP_046785491.1  luc7-like protein 3 isoform X3

      UniProtKB/TrEMBL
      Q5ZIU4

    10. XM_046929540.1 → XP_046785496.1  luc7-like protein 3 isoform X7

      UniProtKB/TrEMBL
      Q5ZIU4

    11. XM_046929537.1 → XP_046785493.1  luc7-like protein 3 isoform X4

      UniProtKB/TrEMBL
      Q5ZIU4

    12. XM_046929536.1 → XP_046785492.1  luc7-like protein 3 isoform X4

      UniProtKB/TrEMBL
      Q5ZIU4

    13. XM_046929533.1 → XP_046785489.1  luc7-like protein 3 isoform X1

      UniProtKB/TrEMBL
      Q5ZIU4

    14. XM_046929547.1 → XP_046785503.1  luc7-like protein 3 isoform X14

    15. XM_046929546.1 → XP_046785502.1  luc7-like protein 3 isoform X13

    RNA

    1. XR_006936511.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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