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    PIBF1 progesterone immunomodulatory binding factor 1 [ Gallus gallus (chicken) ]

    Gene ID: 418820, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PIBF1provided by CGNC
    Official Full Name
    progesterone immunomodulatory binding factor 1provided by CGNC
    Primary source
    CGNC:12708
    See related
    Ensembl:ENSGALG00010000823
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    C13orf24
    Orthologs
    human mouse all
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    Genomic context

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    See PIBF1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (156046150..156162598, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (155985231..156101748, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase TRAIP-like Neighboring gene Kruppel-like factor 12 Neighboring gene uncharacterized LOC121113414 Neighboring gene Kruppel like factor 5 Neighboring gene DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease Neighboring gene bora, aurora kinase A activator Neighboring gene mitotic spindle organizing protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centriolar satellite IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    progesterone-induced-blocking factor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      156046150..156162598 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015276959.4 → XP_015132445.2  progesterone-induced-blocking factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0X6J2
      Related
      ENSGALP00010001026.1, ENSGALT00010001825.1
      Conserved Domains (2) summary
      TIGR02168
      Location:277 → 576
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:36 → 412
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    2. XM_040704824.2 → XP_040560758.1  progesterone-induced-blocking factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0X6J2
      Conserved Domains (2) summary
      TIGR02168
      Location:277 → 576
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:36 → 412
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    3. XM_417014.8 → XP_417014.3  progesterone-induced-blocking factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0X6J2
      Conserved Domains (2) summary
      TIGR02168
      Location:277 → 576
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:36 → 412
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    4. XM_004938652.5 → XP_004938709.2  progesterone-induced-blocking factor 1 isoform X3

      Conserved Domains (2) summary
      TIGR02168
      Location:277 → 576
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:36 → 412
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    5. XM_040704826.2 → XP_040560760.1  progesterone-induced-blocking factor 1 isoform X2

      Conserved Domains (2) summary
      TIGR02168
      Location:277 → 576
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:36 → 412
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      155985231..156101748 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040657739.2 → XP_040513673.1  progesterone-induced-blocking factor 1 isoform X1

      Conserved Domains (2) summary
      TIGR02168
      Location:379 → 679
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:36 → 412
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    2. XM_040657740.2 → XP_040513674.1  progesterone-induced-blocking factor 1 isoform X1

      Conserved Domains (2) summary
      TIGR02168
      Location:379 → 679
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:36 → 412
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    3. XM_040657738.2 → XP_040513672.1  progesterone-induced-blocking factor 1 isoform X1

      Conserved Domains (2) summary
      TIGR02168
      Location:379 → 679
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:36 → 412
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    4. XM_040657742.2 → XP_040513676.1  progesterone-induced-blocking factor 1 isoform X3

      Conserved Domains (2) summary
      TIGR02168
      Location:277 → 624
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:36 → 412
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    5. XM_040657741.2 → XP_040513675.1  progesterone-induced-blocking factor 1 isoform X2

      Conserved Domains (2) summary
      TIGR02168
      Location:277 → 624
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:36 → 412
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    Nucleotide Protein
    Heading Accession and Version

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