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    CDAN1 codanin 1 [ Gallus gallus (chicken) ]

    Gene ID: 423239, updated on 3-Dec-2024

    Summary

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    Symbol
    CDAN1provided by CGNC
    Full Name
    codanin 1provided by CGNC
    Primary source
    CGNC:6967
    See related
    Ensembl:ENSGALG00010019846
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CDAN1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (25355061..25392302, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (25321892..25359030, complement)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 57 Neighboring gene HAUS augmin like complex subunit 2 Neighboring gene StAR related lipid transfer domain containing 9 Neighboring gene uncharacterized LOC121113275 Neighboring gene uncharacterized LOC423240 Neighboring gene tau tubulin kinase 2 Neighboring gene peripherin 2 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in chromatin organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    codanin-1
    Names
    congenital dyserythropoietic anemia, type I

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      25355061..25392302 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_421163.8 → XP_421163.6  codanin-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZBL6

    2. XM_040701909.2 → XP_040557843.1  codanin-1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZBL6

    3. XM_040701908.2 → XP_040557842.1  codanin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBL6

    4. XM_040701906.2 → XP_040557840.1  codanin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBL6

    5. XM_040701910.2 → XP_040557844.1  codanin-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZBL6
      Related
      ENSGALP00010028313.1, ENSGALT00010047950.1

    RNA

    1. XR_005860477.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      25321892..25359030 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040673735.2 → XP_040529669.2  codanin-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZBL6

    2. XM_040673736.2 → XP_040529670.2  codanin-1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZBL6

    3. XM_040673734.2 → XP_040529668.2  codanin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBL6

    4. XM_040673733.2 → XP_040529667.2  codanin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBL6

    5. XM_040673737.2 → XP_040529671.2  codanin-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZBL6

    RNA

    1. XR_005850827.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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