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    CPEB3 cytoplasmic polyadenylation element binding protein 3 [ Gallus gallus (chicken) ]

    Gene ID: 423816, updated on 3-Dec-2024

    Summary

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    Symbol
    CPEB3provided by CGNC
    Full Name
    cytoplasmic polyadenylation element binding protein 3provided by CGNC
    Primary source
    CGNC:5218
    See related
    Ensembl:ENSGALG00010021518
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CPEB3 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (21639603..21728184)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (21530673..21619262)

    Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene insulin degrading enzyme Neighboring gene membrane associated ring-CH-type finger 5 Neighboring gene uncharacterized LOC101750135 Neighboring gene uncharacterized LOC107053702 Neighboring gene B-TFIID TATA-box binding protein associated factor 1 Neighboring gene dual specificity phosphatase 11 Neighboring gene uncharacterized LOC112532705

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA 3'-UTR binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA regulatory element binding translation repressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation factor activity, RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytoplasmic polyadenylation element-binding protein 3

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      21639603..21728184
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046942991.1 → XP_046798947.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK50

    2. XM_015288842.4 → XP_015144328.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK50
      Conserved Domains (3) summary
      pfam16366
      Location:606 → 667
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12724
      Location:423 → 514
      RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:531 → 611
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

    3. XM_015288841.4 → XP_015144327.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK50
      Conserved Domains (3) summary
      pfam16366
      Location:606 → 667
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12724
      Location:423 → 514
      RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:531 → 611
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

    4. XM_046942992.1 → XP_046798948.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK50

    5. XM_015288840.4 → XP_015144326.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK50
      Conserved Domains (3) summary
      pfam16366
      Location:606 → 667
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12724
      Location:423 → 514
      RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:531 → 611
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

    6. XM_046942993.1 → XP_046798949.1  cytoplasmic polyadenylation element-binding protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZK50

    7. XM_015288837.4 → XP_015144323.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK50
      Conserved Domains (3) summary
      pfam16366
      Location:606 → 667
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12724
      Location:423 → 514
      RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:531 → 611
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

    8. XM_004942160.5 → XP_004942217.2  cytoplasmic polyadenylation element-binding protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZK50
      Conserved Domains (3) summary
      pfam16366
      Location:598 → 659
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12724
      Location:415 → 506
      RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:523 → 603
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

    9. XM_015288843.4 → XP_015144329.1  cytoplasmic polyadenylation element-binding protein 3 isoform X5

      UniProtKB/TrEMBL
      A0A8V0ZK55
      Conserved Domains (3) summary
      pfam16366
      Location:512 → 573
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12726
      Location:437 → 517
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cl17169
      Location:374 → 420
      RRM_SF; RNA recognition motif (RRM) superfamily

    10. XM_015288838.4 → XP_015144324.1  cytoplasmic polyadenylation element-binding protein 3 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZD11, A0A8V0ZK50
      Related
      ENSGALP00010031164.1, ENSGALT00010052182.1
      Conserved Domains (3) summary
      pfam16366
      Location:583 → 644
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12724
      Location:400 → 491
      RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:508 → 588
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

    11. XM_421688.8 → XP_421688.4  cytoplasmic polyadenylation element-binding protein 3 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZIK6, A0A8V0ZK50
      Related
      ENSGALP00010031166.1, ENSGALT00010052186.1
      Conserved Domains (3) summary
      pfam16366
      Location:575 → 636
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12724
      Location:392 → 483
      RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:500 → 580
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

    12. XM_015288844.4 → XP_015144330.1  cytoplasmic polyadenylation element-binding protein 3 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZK55
      Related
      ENSGALP00010031168.1, ENSGALT00010052188.1
      Conserved Domains (3) summary
      pfam16366
      Location:489 → 550
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12726
      Location:414 → 494
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cl17169
      Location:351 → 397
      RRM_SF; RNA recognition motif (RRM) superfamily

    13. XM_046942994.1 → XP_046798950.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK50

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      21530673..21619262
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046920430.1 → XP_046776386.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK50

    2. XM_040675445.2 → XP_040531379.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK50
      Conserved Domains (3) summary
      pfam16366
      Location:606 → 667
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12724
      Location:423 → 514
      RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:531 → 611
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

    3. XM_040675444.2 → XP_040531378.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK50
      Conserved Domains (3) summary
      pfam16366
      Location:606 → 667
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12724
      Location:423 → 514
      RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:531 → 611
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

    4. XM_046920431.1 → XP_046776387.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK50

    5. XM_040675443.2 → XP_040531377.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK50
      Conserved Domains (3) summary
      pfam16366
      Location:606 → 667
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12724
      Location:423 → 514
      RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:531 → 611
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

    6. XM_046920432.1 → XP_046776388.1  cytoplasmic polyadenylation element-binding protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZK50

    7. XM_040675439.2 → XP_040531373.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK50
      Conserved Domains (3) summary
      pfam16366
      Location:606 → 667
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12724
      Location:423 → 514
      RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:531 → 611
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

    8. XM_040675440.2 → XP_040531374.1  cytoplasmic polyadenylation element-binding protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZK50
      Conserved Domains (3) summary
      pfam16366
      Location:598 → 659
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12724
      Location:415 → 506
      RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:523 → 603
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

    9. XM_040675446.2 → XP_040531380.1  cytoplasmic polyadenylation element-binding protein 3 isoform X5

      UniProtKB/TrEMBL
      A0A8V0ZK55
      Conserved Domains (3) summary
      pfam16366
      Location:512 → 573
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12726
      Location:437 → 517
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cl17169
      Location:374 → 420
      RRM_SF; RNA recognition motif (RRM) superfamily

    10. XM_040675441.2 → XP_040531375.1  cytoplasmic polyadenylation element-binding protein 3 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZD11, A0A8V0ZK50
      Conserved Domains (3) summary
      pfam16366
      Location:583 → 644
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12724
      Location:400 → 491
      RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:508 → 588
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

    11. XM_040675442.2 → XP_040531376.1  cytoplasmic polyadenylation element-binding protein 3 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZIK6, A0A8V0ZK50
      Conserved Domains (3) summary
      pfam16366
      Location:575 → 636
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12724
      Location:392 → 483
      RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:500 → 580
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

    12. XM_040675447.2 → XP_040531381.1  cytoplasmic polyadenylation element-binding protein 3 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZK55
      Conserved Domains (3) summary
      pfam16366
      Location:489 → 550
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      cd12726
      Location:414 → 494
      RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cl17169
      Location:351 → 397
      RRM_SF; RNA recognition motif (RRM) superfamily

    13. XM_046920433.1 → XP_046776389.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZK50
    Nucleotide Protein
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