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    CUL5 cullin 5 [ Gallus gallus (chicken) ]

    Gene ID: 418969, updated on 17-Aug-2024

    Summary

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    Symbol
    CUL5provided by CGNC
    Full Name
    cullin 5provided by CGNC
    Primary source
    CGNC:12892
    See related
    Ensembl:ENSGALG00010004901
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CUL5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (180230499..180261907, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (180263078..180294511, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene nuclear protein, coactivator of histone transcription Neighboring gene acetyl-CoA acetyltransferase 1 Neighboring gene RAB39A, member RAS oncogene family Neighboring gene uncharacterized LOC107052166

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Cul5-RING ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of SCF ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cullin-5
    Names
    Vasopressin-activated calcium-mobilizing receptor-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      180230499..180261907 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015279528.4 → XP_015135014.1  cullin-5 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XKY0
      Related
      ENSGALP00010006444.1, ENSGALT00010011472.1
      Conserved Domains (2) summary
      pfam00888
      Location:19 → 672
      Cullin; Cullin family
      pfam10557
      Location:711 → 771
      Cullin_Nedd8; Cullin protein neddylation domain

    2. XM_046898231.1 → XP_046754187.1  cullin-5 isoform X2

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      180263078..180294511 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040659149.2 → XP_040515083.1  cullin-5 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XKY0
      Conserved Domains (2) summary
      pfam00888
      Location:19 → 672
      Cullin; Cullin family
      pfam10557
      Location:711 → 771
      Cullin_Nedd8; Cullin protein neddylation domain

    2. XM_046909287.1 → XP_046765243.1  cullin-5 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials