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    TSPEAR thrombospondin type laminin G domain and EAR repeats [ Gallus gallus (chicken) ]

    Gene ID: 424836, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TSPEARprovided by CGNC
    Official Full Name
    thrombospondin type laminin G domain and EAR repeatsprovided by CGNC
    Primary source
    CGNC:4212
    See related
    Ensembl:ENSGALG00010025563
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    C21orf29
    Orthologs
    human mouse all
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    Genomic context

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    See TSPEAR in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (4840923..4854031)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (4674320..4687463)

    Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene PTTG1 interacting protein Neighboring gene small ubiquitin-like modifier 3 Neighboring gene ubiquitin conjugating enzyme E2 G2 Neighboring gene transient receptor potential cation channel subfamily M member 2 Neighboring gene extensin-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    thrombospondin-type laminin G domain and EAR repeat-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      4840923..4854031
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_422647.8 → XP_422647.4  thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3E9
      Related
      ENSGALP00010038550.1, ENSGALT00010062357.1
      Conserved Domains (1) summary
      cl22861
      Location:35 → 219
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

    2. XM_004937023.5 → XP_004937080.2  thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X2

      UniProtKB/TrEMBL
      A0A8V1A3E9
      Conserved Domains (1) summary
      cl22861
      Location:28 → 219
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

    3. XM_015277076.4 → XP_015132562.2  thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X3

      UniProtKB/TrEMBL
      A0A8V1A3E9

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      4674320..4687463
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040679061.2 → XP_040534995.1  thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3E9
      Conserved Domains (1) summary
      cl22861
      Location:59 → 219
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

    2. XM_040679062.2 → XP_040534996.1  thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X2

      UniProtKB/TrEMBL
      A0A8V1A3E9
      Conserved Domains (1) summary
      cl22861
      Location:59 → 219
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

    3. XM_040679063.2 → XP_040534997.1  thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X3

      UniProtKB/TrEMBL
      A0A8V1A3E9
    Nucleotide Protein Strain
    Heading Accession and Version

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