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    GLIS1 GLIS family zinc finger 1 [ Gallus gallus (chicken) ]

    Gene ID: 424652, updated on 3-Dec-2024

    Summary

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    Symbol
    GLIS1provided by CGNC
    Full Name
    GLIS family zinc finger 1provided by CGNC
    Primary source
    CGNC:8149
    See related
    Ensembl:ENSGALG00010025250
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See GLIS1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (24591950..24764561, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (24604221..24777317, complement)

    Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene DMRT like family B with proline rich C-terminal 1 Neighboring gene uncharacterized LOC121111425 Neighboring gene uncharacterized LOC124418132 Neighboring gene NDC1 transmembrane nucleoporin Neighboring gene Yip1 domain family member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein GLIS1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      24591950..24764561 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046944912.1 → XP_046800868.1  zinc finger protein GLIS1 isoform X6

      UniProtKB/TrEMBL
      A0A8V1A9J1

    2. XM_046944908.1 → XP_046800864.1  zinc finger protein GLIS1 isoform X2

      UniProtKB/TrEMBL
      A0A8V1A9J1
      Related
      ENSGALP00010038063.1, ENSGALT00010061625.1

    3. XM_046944909.1 → XP_046800865.1  zinc finger protein GLIS1 isoform X3

      UniProtKB/TrEMBL
      A0A8V1A9J1

    4. XM_046944910.1 → XP_046800866.1  zinc finger protein GLIS1 isoform X4

      UniProtKB/TrEMBL
      A0A8V1A9J1

    5. XM_015291201.4 → XP_015146687.1  zinc finger protein GLIS1 isoform X1

      UniProtKB/TrEMBL
      A0A8V1A9J1, F1ND41
      Related
      ENSGALP00010038062.1, ENSGALT00010061623.1
      Conserved Domains (4) summary
      COG5048
      Location:503 → 686
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:342 → 585
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:502 → 524
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:516 → 543
      zf-H2C2_2; Zinc-finger double domain

    6. XM_046944911.1 → XP_046800867.1  zinc finger protein GLIS1 isoform X5

      UniProtKB/TrEMBL
      A0A8V1A9J1
      Related
      ENSGALP00010038058.1, ENSGALT00010061619.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      24604221..24777317 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046923163.1 → XP_046779119.1  zinc finger protein GLIS1 isoform X6

      UniProtKB/TrEMBL
      A0A8V1A9J1

    2. XM_040678123.2 → XP_040534057.1  zinc finger protein GLIS1 isoform X2

      UniProtKB/TrEMBL
      A0A8V1A9J1
      Conserved Domains (3) summary
      COG5048
      Location:503 → 746
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:342 → 585
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:502 → 524
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_040678124.2 → XP_040534058.1  zinc finger protein GLIS1 isoform X3

      UniProtKB/TrEMBL
      A0A8V1A9J1
      Conserved Domains (2) summary
      COG5189
      Location:342 → 585
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:502 → 524
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_040678125.2 → XP_040534059.1  zinc finger protein GLIS1 isoform X4

      UniProtKB/TrEMBL
      A0A8V1A9J1
      Conserved Domains (3) summary
      COG5048
      Location:503 → 750
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:342 → 585
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:502 → 524
      ZF_C2H2; C2H2 Zn finger [structural motif]

    5. XM_040678121.2 → XP_040534055.1  zinc finger protein GLIS1 isoform X1

      UniProtKB/TrEMBL
      A0A8V1A9J1
      Conserved Domains (3) summary
      COG5048
      Location:503 → 750
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:342 → 585
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:502 → 524
      ZF_C2H2; C2H2 Zn finger [structural motif]

    6. XM_040678126.2 → XP_040534060.1  zinc finger protein GLIS1 isoform X5

      UniProtKB/TrEMBL
      A0A8V1A9J1
      Conserved Domains (3) summary
      COG5048
      Location:445 → 692
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:284 → 527
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:444 → 466
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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