U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LZTR1 leucine zipper like transcription regulator 1 [ Gallus gallus (chicken) ]

    Gene ID: 421166, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Symbol
    LZTR1provided by CGNC
    Full Name
    leucine zipper like transcription regulator 1provided by CGNC
    Primary source
    CGNC:66394
    See related
    Ensembl:ENSGALG00010026117
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LZTR1 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (632466..652061)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (601701..621305)

    Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene lysine demethylase 5B Neighboring gene importin 9 Neighboring gene arginyl aminopeptidase Neighboring gene neuron navigator 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    leucine-zipper-like transcriptional regulator 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      632466..652061
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040652791.2 → XP_040508725.1  leucine-zipper-like transcriptional regulator 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AAH5
      Conserved Domains (6) summary
      PLN02153
      Location:60 → 357
      PLN02153; epithiospecifier protein
      sd00038
      Location:60 → 106
      Kelch; KELCH repeat [structural motif]
      cd18308
      Location:360 → 517
      BTB1_POZ_LZTR1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
      cd18309
      Location:593 → 718
      BTB2_POZ_LZTR1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
      cd18505
      Location:521 → 579
      BACK1_LZTR1; first BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
      cd18506
      Location:714 → 748
      BACK2_LZTR1; second BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)

    2. XM_025143929.3 → XP_024999697.2  leucine-zipper-like transcriptional regulator 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5P134, A0A8V1AAH5
      Related
      ENSGALP00010039277.1, ENSGALT00010063629.1
      Conserved Domains (6) summary
      PLN02153
      Location:60 → 357
      PLN02153; epithiospecifier protein
      sd00038
      Location:60 → 106
      Kelch; KELCH repeat [structural motif]
      cd18308
      Location:360 → 517
      BTB1_POZ_LZTR1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
      cd18309
      Location:593 → 718
      BTB2_POZ_LZTR1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
      cd18505
      Location:521 → 579
      BACK1_LZTR1; first BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
      cd18506
      Location:714 → 774
      BACK2_LZTR1; second BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      601701..621305
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040691305.2 → XP_040547239.1  leucine-zipper-like transcriptional regulator 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AAH5
      Conserved Domains (6) summary
      PLN02153
      Location:60 → 357
      PLN02153; epithiospecifier protein
      sd00038
      Location:60 → 106
      Kelch; KELCH repeat [structural motif]
      cd18308
      Location:360 → 517
      BTB1_POZ_LZTR1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
      cd18309
      Location:593 → 718
      BTB2_POZ_LZTR1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
      cd18505
      Location:521 → 579
      BACK1_LZTR1; first BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
      cd18506
      Location:714 → 748
      BACK2_LZTR1; second BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)

    2. XM_040691304.2 → XP_040547238.1  leucine-zipper-like transcriptional regulator 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V1AAH5
      Conserved Domains (6) summary
      PLN02153
      Location:60 → 357
      PLN02153; epithiospecifier protein
      sd00038
      Location:60 → 106
      Kelch; KELCH repeat [structural motif]
      cd18308
      Location:360 → 517
      BTB1_POZ_LZTR1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
      cd18309
      Location:593 → 718
      BTB2_POZ_LZTR1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
      cd18505
      Location:521 → 579
      BACK1_LZTR1; first BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
      cd18506
      Location:714 → 774
      BACK2_LZTR1; second BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials