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    SRPK1 SRSF protein kinase 1 [ Gallus gallus (chicken) ]

    Gene ID: 421185, updated on 3-Dec-2024

    Summary

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    Official Symbol
    SRPK1provided by CGNC
    Official Full Name
    SRSF protein kinase 1provided by CGNC
    Primary source
    CGNC:586
    See related
    Ensembl:ENSGALG00010026964
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SRPK1 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (143448..163403, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (112447..132378, complement)

    Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene lipoma HMGIC fusion partner-like 5 Neighboring gene colipase Neighboring gene solute carrier family 26 member 8 Neighboring gene mitogen-activated protein kinase 14

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in spliceosomal complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase SRPK1; SRSF protein kinase 1
    Names
    SFRS protein kinase 1
    XP_004934851.4
    XP_040547216.1
    XP_040547217.2
    XP_419265.4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      143448..163403 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_419265.7 → XP_419265.4  SRSF protein kinase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V1AE67
      Related
      ENSGALP00010039791.1, ENSGALT00010065381.1
      Conserved Domains (2) summary
      smart00220
      Location:171 → 315
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cl21453
      Location:161 → 746
      PKc_like; Protein Kinases, catalytic domain

    2. XM_004934794.5 → XP_004934851.4  SRSF protein kinase 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V1A1P3
      Related
      ENSGALP00010039790.1, ENSGALT00010065377.1

    RNA

    1. XR_001470144.3 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      112447..132378 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040691282.1 → XP_040547216.1  SRSF protein kinase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V1AE67
      Conserved Domains (1) summary
      cl21453
      Location:162 → 747
      PKc_like; Protein Kinases, catalytic domain

    2. XM_040691283.2 → XP_040547217.2  SRSF protein kinase 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V1A1P3

    RNA

    1. XR_005856125.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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