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    SNRPE small nuclear ribonucleoprotein polypeptide E [ Gallus gallus (chicken) ]

    Gene ID: 396180, updated on 17-Aug-2024

    Summary

    Symbol
    SNRPEprovided by CGNC
    Full Name
    small nuclear ribonucleoprotein polypeptide Eprovided by CGNC
    Primary source
    CGNC:49689
    See related
    Ensembl:ENSGALG00010025661
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
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    Genomic context

    See SNRPE in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (1714415..1716348)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (1684577..1686510)

    Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene microRNA let-7a-1 Neighboring gene mitochondrial carrier 1 Neighboring gene uncharacterized LOC124416953 Neighboring gene SRY-box 13 Neighboring gene ethanolamine kinase 2

    Genomic regions, transcripts, and products

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in spliceosomal snRNP assembly IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of U1 snRNP IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of U2 snRNP IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of U4 snRNP IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of U4/U6 x U5 tri-snRNP complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of U5 snRNP IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    small nuclear ribonucleoprotein E
    Names
    SmE protein
    sm protein E
    sm-E
    snRNP-E

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205250.2NP_990581.1  small nuclear ribonucleoprotein E

      See identical proteins and their annotated locations for NP_990581.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000356
      UniProtKB/Swiss-Prot
      P62303
      UniProtKB/TrEMBL
      A0A8V1A3X3
      Related
      ENSGALP00010038739.1, ENSGALT00010062654.1
      Conserved Domains (1) summary
      cd01718
      Location:1189
      Sm_E; Sm protein E

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1714415..1716348
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1684577..1686510
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)