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    SKA2P1 spindle and kinetochore associated complex subunit 2 pseudogene 1 [ Gallus gallus (chicken) ]

    Gene ID: 417629, updated on 17-Aug-2024

    Summary

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    Symbol
    SKA2P1provided by CGNC
    Full Name
    spindle and kinetochore associated complex subunit 2 pseudogene 1provided by CGNC
    Primary source
    CGNC:50561
    See related
    Ensembl:ENSGALG00010029245
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SKA2
    Orthologs
    human mouse all
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    Genomic context

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    See SKA2P1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (7672306..7679714, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (7409089..7416481, complement)

    Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1E Neighboring gene uncharacterized LOC121107277 Neighboring gene tripartite motif containing 37 Neighboring gene microRNA 301b Neighboring gene microRNA 130c Neighboring gene proline rich 11 Neighboring gene uncharacterized LOC121107279 Neighboring gene SMG8 nonsense mediated mRNA decay factor Neighboring gene glycerophosphodiester phosphodiesterase domain containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chromosome segregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of outer kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in spindle microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spindle and kinetochore-associated protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      7672306..7679714 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_415873.8 → XP_415873.2  spindle and kinetochore-associated protein 2

      UniProtKB/TrEMBL
      A0A8V1AGX5, A0A8V1AMR7
      Related
      ENSGALP00010043385.1, ENSGALT00010070694.1
      Conserved Domains (1) summary
      cl17165
      Location:5 → 120
      SKA2; Spindle and kinetochore-associated protein 2

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      7409089..7416481 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040687417.2 → XP_040543351.1  spindle and kinetochore-associated protein 2

      UniProtKB/TrEMBL
      A0A8V1AMR7
      Conserved Domains (1) summary
      cl17165
      Location:5 → 120
      SKA2; Spindle and kinetochore-associated protein 2
    Nucleotide Protein Strain
    Heading Accession and Version

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