VAPA VAMP associated protein A [Gallus gallus (chicken)] - Gene

Summary

Symbol: VAPAprovided by CGNC
Full Name: VAMP associated protein Aprovided by CGNC
Primary source: CGNC:54859
See related: Ensembl:ENSGALG00010001749
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	2	NC_052533.1 (97965836..97997739, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	2	NC_052574.1 (98024522..98056423, complement)

Chromosome 2 - NC_052533.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables FFAT motif binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in neuron projection development	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in endoplasmic reticulum membrane	IEA Inferred from Electronic Annotation more info	PubMed
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: vesicle-associated membrane protein-associated protein A

Names: VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001080869.3 → NP_001074338.1 vesicle-associated membrane protein-associated protein A isoform 2

See identical proteins and their annotated locations for NP_001074338.1

Status: VALIDATED

Source sequence(s)

JAENSK010000043

UniProtKB/TrEMBL

Q5F419

Conserved Domains (1) summary

pfam00635
Location:13 → 117

Motile_Sperm; MSP (Major sperm protein) domain
NM_001389455.2 → NP_001376384.1 vesicle-associated membrane protein-associated protein A isoform 1

Status: VALIDATED

Source sequence(s)

JAENSK010000043

UniProtKB/TrEMBL

A0A8V0X6S4

Related

ENSGALP00010002299.1, ENSGALT00010004000.1

Conserved Domains (1) summary

pfam00635
Location:13 → 117

Motile_Sperm; MSP (Major sperm protein) domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

97965836..97997739 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

98024522..98056423 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)