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    SYT2 synaptotagmin 2 [ Gallus gallus (chicken) ]

    Gene ID: 396327, updated on 17-Aug-2024

    Summary

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    Symbol
    SYT2provided by CGNC
    Full Name
    synaptotagmin 2provided by CGNC
    Primary source
    CGNC:49754
    See related
    Ensembl:ENSGALG00010026315
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SYT2 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (706783..719717)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (676134..689037)

    Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene arginyl aminopeptidase Neighboring gene neuron navigator 1 Neighboring gene protein phosphatase 1 regulatory subunit 12B Neighboring gene microRNA 6607 Neighboring gene cysteine and glycine rich protein 1 Neighboring gene pleckstrin homology like domain family A member 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Patterns of presynaptic gene expression define two stages of synaptic differentiation. Lou XJ, et al. Mol Cell Neurosci, 1995 Jun. PMID 7496630
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables clathrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylserine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion-regulated exocytosis of neurotransmitter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of calcium ion-dependent exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of dopamine secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dense core granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptotagmin-2
    Names
    synaptotagmin II

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      706783..719717
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003642713.6 → XP_003642761.2  synaptotagmin-2

      UniProtKB/TrEMBL
      A0A8V1A869, A0A8V1AD51
      Related
      ENSGALP00010039422.1, ENSGALT00010064051.1
      Conserved Domains (3) summary
      cd08385
      Location:135 → 258
      C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
      cd08402
      Location:267 → 402
      C2B_Synaptotagmin-1; C2 domain second repeat present in Synaptotagmin 1
      cd21964
      Location:2 → 109
      Syt2_N; N-terminal domain of synaptotagmin-2 (Syt2) and similar proteins

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      676134..689037
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040691329.2 → XP_040547263.1  synaptotagmin-2

      UniProtKB/TrEMBL
      A0A8V1A869, A0A8V1AD51
      Conserved Domains (3) summary
      cd08385
      Location:135 → 258
      C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
      cd08402
      Location:267 → 402
      C2B_Synaptotagmin-1; C2 domain second repeat present in Synaptotagmin 1
      cd21964
      Location:2 → 109
      Syt2_N; N-terminal domain of synaptotagmin-2 (Syt2) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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