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    C6orf89 C6orf89 homolog [ Gallus gallus (chicken) ]

    Gene ID: 419817, updated on 3-Dec-2024

    Summary

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    Official Symbol
    C6orf89provided by CGNC
    Official Full Name
    C6orf89 homologprovided by CGNC
    Primary source
    CGNC:346
    See related
    Ensembl:ENSGALG00010025637
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    C26H6orf89
    Orthologs
    human mouse all
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    Genomic context

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    See C6orf89 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (1652170..1672869)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (1622317..1643016)

    Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene cyclin dependent kinase inhibitor 1A Neighboring gene RAB44, member RAS oncogene family Neighboring gene peptidase inhibitor 16 Neighboring gene microRNA let-7a-1 Neighboring gene microRNA let-7e Neighboring gene mitochondrial carrier 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bombesin receptor-activated protein C6orf89 homolog
    Names
    chromosome 26 C6orf89 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001012548.2 → NP_001012566.1  bombesin receptor-activated protein C6orf89 homolog

      See identical proteins and their annotated locations for NP_001012566.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000356
      UniProtKB/TrEMBL
      A0A8V1A3T0, Q5F344
      Related
      ENSGALP00010038682.1, ENSGALT00010062569.1

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1652170..1672869
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015298899.4 → XP_015154385.2  bombesin receptor-activated protein C6orf89 homolog isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3T0, A0A8V1A659
      Related
      ENSGALP00010038684.1, ENSGALT00010062572.1

    2. XM_015298901.3 → XP_015154387.1  bombesin receptor-activated protein C6orf89 homolog isoform X2

      UniProtKB/TrEMBL
      A0A8V1A3T0, Q5F344
      Related
      ENSGALP00010038681.1, ENSGALT00010062568.1

    3. XM_015298900.4 → XP_015154386.1  bombesin receptor-activated protein C6orf89 homolog isoform X2

      UniProtKB/TrEMBL
      A0A8V1A3T0, Q5F344

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1622317..1643016
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046932904.1 → XP_046788860.1  bombesin receptor-activated protein C6orf89 homolog isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3T0, A0A8V1A659

    2. XM_046932906.1 → XP_046788862.1  bombesin receptor-activated protein C6orf89 homolog isoform X2

      UniProtKB/TrEMBL
      A0A8V1A3T0, Q5F344

    3. XM_046932905.1 → XP_046788861.1  bombesin receptor-activated protein C6orf89 homolog isoform X2

      UniProtKB/TrEMBL
      A0A8V1A3T0, Q5F344
    Nucleotide Protein Strain
    Heading Accession and Version

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