U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RPH3AL rabphilin 3A-like (without C2 domains) [ Gallus gallus (chicken) ]

    Gene ID: 772026, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Symbol
    RPH3ALprovided by CGNC
    Full Name
    rabphilin 3A-like (without C2 domains)provided by CGNC
    Primary source
    CGNC:29597
    See related
    Ensembl:ENSGALG00010029777
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RPH3AL in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (7478563..7506962)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (7215551..7243921)

    Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene gem nuclear organelle associated protein 4 Neighboring gene family with sequence similarity 57 member A Neighboring gene VPS53 subunit of GARP complex Neighboring gene uncharacterized LOC107054807 Neighboring gene refilin B Neighboring gene double C2 domain beta Neighboring gene opsin, pineal

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    rab effector Noc2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      7478563..7506962
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046902692.1 → XP_046758648.1  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6, A0A8V1AM95

    2. XM_046902689.1 → XP_046758645.1  rab effector Noc2 isoform X1

      UniProtKB/TrEMBL
      A0A8V1AKR6

    3. XM_004946706.5 → XP_004946763.2  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6, A0A8V1AM95
      Conserved Domains (1) summary
      cd15763
      Location:86 → 149
      FYVE_RPH3L; FYVE-related domain found in Rab effector Noc2 and similar proteins

    4. XM_004946703.5 → XP_004946760.2  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6, A0A8V1AM95
      Conserved Domains (1) summary
      cd15763
      Location:86 → 149
      FYVE_RPH3L; FYVE-related domain found in Rab effector Noc2 and similar proteins

    5. XM_004946707.5 → XP_004946764.2  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6, A0A8V1AM95
      Related
      ENSGALP00010044729.1, ENSGALT00010072039.1
      Conserved Domains (1) summary
      cd15763
      Location:86 → 149
      FYVE_RPH3L; FYVE-related domain found in Rab effector Noc2 and similar proteins

    6. XM_001235227.6 → XP_001235228.2  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6, A0A8V1AM95
      Conserved Domains (1) summary
      cd15763
      Location:86 → 149
      FYVE_RPH3L; FYVE-related domain found in Rab effector Noc2 and similar proteins

    7. XM_040650489.2 → XP_040506423.1  rab effector Noc2 isoform X3

      UniProtKB/TrEMBL
      A0A8V1ANT7
      Related
      ENSGALP00010044728.1, ENSGALT00010072038.1
      Conserved Domains (1) summary
      cl28890
      Location:89 → 136
      FYVE_like_SF; FYVE domain like superfamily

    8. XM_025142000.3 → XP_024997768.2  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6, A0A8V1AM95
      Conserved Domains (1) summary
      cd15763
      Location:86 → 149
      FYVE_RPH3L; FYVE-related domain found in Rab effector Noc2 and similar proteins

    9. XM_004946705.5 → XP_004946762.2  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6, A0A8V1AM95
      Related
      ENSGALP00010044727.1, ENSGALT00010072037.1
      Conserved Domains (1) summary
      cd15763
      Location:86 → 149
      FYVE_RPH3L; FYVE-related domain found in Rab effector Noc2 and similar proteins

    10. XM_046902690.1 → XP_046758646.1  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6, A0A8V1AM95

    11. XM_046902691.1 → XP_046758647.1  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6, A0A8V1AM95

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      7215551..7243921
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046930375.1 → XP_046786331.1  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6

    2. XM_046930372.1 → XP_046786328.1  rab effector Noc2 isoform X1

      UniProtKB/TrEMBL
      A0A8V1AKR6

    3. XM_040687406.2 → XP_040543340.1  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6
      Conserved Domains (1) summary
      cd15763
      Location:86 → 149
      FYVE_RPH3L; FYVE-related domain found in Rab effector Noc2 and similar proteins

    4. XM_040687408.2 → XP_040543342.1  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6
      Conserved Domains (1) summary
      cd15763
      Location:86 → 149
      FYVE_RPH3L; FYVE-related domain found in Rab effector Noc2 and similar proteins

    5. XM_040687407.2 → XP_040543341.1  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6
      Conserved Domains (1) summary
      cd15763
      Location:86 → 149
      FYVE_RPH3L; FYVE-related domain found in Rab effector Noc2 and similar proteins

    6. XM_040687405.2 → XP_040543339.1  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6
      Conserved Domains (1) summary
      cd15763
      Location:86 → 149
      FYVE_RPH3L; FYVE-related domain found in Rab effector Noc2 and similar proteins

    7. XM_040687411.2 → XP_040543345.1  rab effector Noc2 isoform X3

      UniProtKB/TrEMBL
      A0A8V1ANT7
      Conserved Domains (1) summary
      cl28890
      Location:89 → 136
      FYVE_like_SF; FYVE domain like superfamily

    8. XM_040687409.2 → XP_040543343.1  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6
      Conserved Domains (1) summary
      cd15763
      Location:86 → 149
      FYVE_RPH3L; FYVE-related domain found in Rab effector Noc2 and similar proteins

    9. XM_040687410.2 → XP_040543344.1  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6
      Conserved Domains (1) summary
      cd15763
      Location:86 → 149
      FYVE_RPH3L; FYVE-related domain found in Rab effector Noc2 and similar proteins

    10. XM_046930373.1 → XP_046786329.1  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6

    11. XM_046930374.1 → XP_046786330.1  rab effector Noc2 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AKR6
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials