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    PPP1R16B protein phosphatase 1 regulatory subunit 16B [ Gallus gallus (chicken) ]

    Gene ID: 419170, updated on 3-Dec-2024

    Summary

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    Official Symbol
    PPP1R16Bprovided by CGNC
    Official Full Name
    protein phosphatase 1 regulatory subunit 16Bprovided by CGNC
    Primary source
    CGNC:2604
    See related
    Ensembl:ENSGALG00010023740
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See PPP1R16B in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 20 NC_052551.1 (4112045..4170224)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 20 NC_052592.1 (3922264..3971958)

    Chromosome 20 - NC_052551.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101749666 Neighboring gene ARP5 actin-related protein 5 homolog Neighboring gene family with sequence similarity 83, member D Neighboring gene family with sequence similarity 83, member D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables enzyme inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein phosphatase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in establishment of endothelial barrier IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of sprouting angiogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein phosphatase 1 regulatory inhibitor subunit 16B
    Names
    protein phosphatase 1, regulatory (inhibitor) subunit 16B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030851.2 → NP_001026022.2  protein phosphatase 1 regulatory inhibitor subunit 16B

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000328
      UniProtKB/TrEMBL
      A0A8V0ZNZ0, Q5ZHY3
      Related
      ENSGALP00010035119.1, ENSGALT00010057882.1
      Conserved Domains (2) summary
      PHA03095
      Location:70 → 300
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:70 → 97
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052551.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      4112045..4170224
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046902824.1 → XP_046758780.1  protein phosphatase 1 regulatory inhibitor subunit 16B isoform X1

      UniProtKB/TrEMBL
      Q5ZHY3

    2. XM_046902823.1 → XP_046758779.1  protein phosphatase 1 regulatory inhibitor subunit 16B isoform X1

      UniProtKB/TrEMBL
      Q5ZHY3

    3. XM_015296355.4 → XP_015151841.2  protein phosphatase 1 regulatory inhibitor subunit 16B isoform X1

      UniProtKB/TrEMBL
      Q5ZHY3
      Conserved Domains (2) summary
      PHA03095
      Location:70 → 300
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:70 → 97
      ANK; ANK repeat [structural motif]

    4. XM_040650669.2 → XP_040506603.1  protein phosphatase 1 regulatory inhibitor subunit 16B isoform X1

      UniProtKB/TrEMBL
      Q5ZHY3
      Conserved Domains (2) summary
      PHA03095
      Location:70 → 300
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:70 → 97
      ANK; ANK repeat [structural motif]

    5. XM_015296357.4 → XP_015151843.2  protein phosphatase 1 regulatory inhibitor subunit 16B isoform X1

      UniProtKB/TrEMBL
      Q5ZHY3
      Conserved Domains (2) summary
      PHA03095
      Location:70 → 300
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:70 → 97
      ANK; ANK repeat [structural motif]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052592.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      3922264..3971958
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046930650.1 → XP_046786606.1  protein phosphatase 1 regulatory inhibitor subunit 16B isoform X1

      UniProtKB/TrEMBL
      Q5ZHY3

    2. XM_046930647.1 → XP_046786603.1  protein phosphatase 1 regulatory inhibitor subunit 16B isoform X1

      UniProtKB/TrEMBL
      Q5ZHY3

    3. XM_046930649.1 → XP_046786605.1  protein phosphatase 1 regulatory inhibitor subunit 16B isoform X1

      UniProtKB/TrEMBL
      Q5ZHY3

    4. XM_046930648.1 → XP_046786604.1  protein phosphatase 1 regulatory inhibitor subunit 16B isoform X1

      UniProtKB/TrEMBL
      Q5ZHY3
    Nucleotide Protein Strain
    Heading Accession and Version

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