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    GALE UDP-galactose-4-epimerase [ Gallus gallus (chicken) ]

    Gene ID: 419686, updated on 3-Dec-2024

    Summary

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    Symbol
    GALEprovided by CGNC
    Full Name
    UDP-galactose-4-epimeraseprovided by CGNC
    Primary source
    CGNC:2971
    See related
    Ensembl:ENSGALG00010015299
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See GALE in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 23 NC_052554.1 (5955468..5958542, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 23 NC_052595.1 (5718758..5721838, complement)

    Chromosome 23 - NC_052554.1Genomic Context describing neighboring genes Neighboring gene PITH domain containing 1 Neighboring gene lysophospholipase 2 Neighboring gene 3-hydroxymethyl-3-methylglutaryl-CoA lyase Neighboring gene alpha-L-fucosidase 1 Neighboring gene cannabinoid receptor 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-glucose 4-epimerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in galactose catabolic process via UDP-galactose IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UDP-glucose 4-epimerase
    XP_040507787.1
    XP_040545864.1
    XP_040545865.1
    XP_046759575.1
    XP_046759576.1
    XP_046788060.1
    XP_046788061.1
    XP_417833.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052554.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5955468..5958542 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046903619.1 → XP_046759575.1  UDP-glucose 4-epimerase isoform X2

      UniProtKB/TrEMBL
      A0A8V0YKH7

    2. XM_046903620.1 → XP_046759576.1  UDP-glucose 4-epimerase isoform X4

      UniProtKB/TrEMBL
      A0A8V0YS43

    3. XM_417833.8 → XP_417833.3  UDP-glucose 4-epimerase isoform X3

      UniProtKB/TrEMBL
      A0A8V0YTL8
      Related
      ENSGALP00010021445.1, ENSGALT00010036809.1
      Conserved Domains (1) summary
      cd05247
      Location:4 → 337
      UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

    4. XM_040651853.2 → XP_040507787.1  UDP-glucose 4-epimerase isoform X1

      UniProtKB/TrEMBL
      A0A8V0YKI1
      Conserved Domains (1) summary
      cd05247
      Location:4 → 292
      UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052595.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      5718758..5721838 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046932104.1 → XP_046788060.1  UDP-glucose 4-epimerase isoform X2

      UniProtKB/TrEMBL
      A0A8V0YKH7

    2. XM_046932105.1 → XP_046788061.1  UDP-glucose 4-epimerase isoform X4

      UniProtKB/TrEMBL
      A0A8V0YS43

    3. XM_040689931.2 → XP_040545865.1  UDP-glucose 4-epimerase isoform X3

      UniProtKB/TrEMBL
      A0A8V0YTL8
      Conserved Domains (1) summary
      cd05247
      Location:4 → 337
      UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

    4. XM_040689930.2 → XP_040545864.1  UDP-glucose 4-epimerase isoform X1

      UniProtKB/TrEMBL
      A0A8V0YKI1
      Conserved Domains (1) summary
      cd05247
      Location:4 → 292
      UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs
    Nucleotide Protein Strain
    Heading Accession and Version

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