U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    GRIK1 glutamate ionotropic receptor kainate type subunit 1 [ Gallus gallus (chicken) ]

    Gene ID: 418489, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Symbol
    GRIK1provided by CGNC
    Full Name
    glutamate ionotropic receptor kainate type subunit 1provided by CGNC
    Primary source
    CGNC:11815
    See related
    Ensembl:ENSGALG00010011636
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See GRIK1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (104253907..104415375, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (104343356..104504919, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene BTB domain and CNC homolog 1 Neighboring gene uncharacterized LOC121106687 Neighboring gene uncharacterized LOC124417197 Neighboring gene claudin-8 Neighboring gene claudin 8

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables kainate selective glutamate receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in modulation of chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic transmission, glutamatergic IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of kainate selective glutamate receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in presynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    glutamate receptor ionotropic, kainate 1
    Names
    glutamate receptor, ionotropic, kainate 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      104253907..104415375 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040646828.2 → XP_040502762.1  glutamate receptor ionotropic, kainate 1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0YE39
      Conserved Domains (2) summary
      cd06382
      Location:45 → 423
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:438 → 723
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    2. XM_015299627.4 → XP_015155113.1  glutamate receptor ionotropic, kainate 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YE39
      Related
      ENSGALP00010015954.1, ENSGALT00010027820.1
      Conserved Domains (2) summary
      cd06382
      Location:45 → 423
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:438 → 807
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    3. XM_040646819.2 → XP_040502753.1  glutamate receptor ionotropic, kainate 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0YE39
      Conserved Domains (2) summary
      cd06382
      Location:45 → 438
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:453 → 738
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    4. XM_015299614.4 → XP_015155100.1  glutamate receptor ionotropic, kainate 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YE39, A0A8V0YE44
      Related
      ENSGALP00010015959.1, ENSGALT00010027829.1
      Conserved Domains (2) summary
      cd06382
      Location:45 → 438
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:453 → 822
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    5. XM_040646813.2 → XP_040502747.2  glutamate receptor ionotropic, kainate 1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YE39

    6. XM_040646808.2 → XP_040502742.1  glutamate receptor ionotropic, kainate 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YIT1
      Related
      ENSGALP00010015957.1, ENSGALT00010027825.1
      Conserved Domains (2) summary
      cd06382
      Location:45 → 438
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:453 → 822
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    7. XM_040646836.2 → XP_040502770.1  glutamate receptor ionotropic, kainate 1 isoform X7

      Conserved Domains (2) summary
      cd06382
      Location:45 → 438
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:453 → 547
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    8. XM_040646844.2 → XP_040502778.1  glutamate receptor ionotropic, kainate 1 isoform X8

      Conserved Domains (2) summary
      cd06382
      Location:45 → 423
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:438 → 532
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    9. XM_040646841.2 → XP_040502775.1  glutamate receptor ionotropic, kainate 1 isoform X7

      Conserved Domains (2) summary
      cd06382
      Location:45 → 438
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:453 → 547
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      104343356..104504919 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040658253.2 → XP_040514187.1  glutamate receptor ionotropic, kainate 1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0YE39
      Conserved Domains (2) summary
      cd06382
      Location:45 → 423
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:438 → 723
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    2. XM_040658250.2 → XP_040514184.1  glutamate receptor ionotropic, kainate 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YE39
      Conserved Domains (2) summary
      cd06382
      Location:45 → 423
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:438 → 807
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    3. XM_040658252.2 → XP_040514186.1  glutamate receptor ionotropic, kainate 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0YE39
      Conserved Domains (2) summary
      cd06382
      Location:45 → 438
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:453 → 738
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    4. XM_040658248.2 → XP_040514182.1  glutamate receptor ionotropic, kainate 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YE39, A0A8V0YE44
      Conserved Domains (2) summary
      cd06382
      Location:45 → 438
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:453 → 822
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    5. XM_040658251.2 → XP_040514185.2  glutamate receptor ionotropic, kainate 1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YE39

    6. XM_040658249.2 → XP_040514183.1  glutamate receptor ionotropic, kainate 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YIT1
      Conserved Domains (2) summary
      cd06382
      Location:45 → 438
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:453 → 822
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    7. XM_040658254.2 → XP_040514188.1  glutamate receptor ionotropic, kainate 1 isoform X7

      Conserved Domains (2) summary
      cd06382
      Location:45 → 438
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:453 → 547
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    8. XM_040658256.2 → XP_040514190.1  glutamate receptor ionotropic, kainate 1 isoform X8

      Conserved Domains (2) summary
      cd06382
      Location:45 → 423
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:438 → 532
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

    9. XM_040658255.2 → XP_040514189.1  glutamate receptor ionotropic, kainate 1 isoform X7

      Conserved Domains (2) summary
      cd06382
      Location:45 → 438
      PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
      cl21456
      Location:453 → 547
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials