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    ARL6 ADP ribosylation factor like GTPase 6 [ Gallus gallus (chicken) ]

    Gene ID: 418433, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ARL6provided by CGNC
    Official Full Name
    ADP ribosylation factor like GTPase 6provided by CGNC
    Primary source
    CGNC:50767
    See related
    Ensembl:ENSGALG00010007110
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See ARL6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (91401326..91420020)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (91436043..91454687)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101750283 Neighboring gene EPH receptor A6 Neighboring gene crystallin beta-gamma domain containing 3 Neighboring gene MYC induced nuclear antigen Neighboring gene gamma-aminobutyric acid type A receptor rho3 subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor-like protein 6
    Names
    ADP-ribosylation factor-like 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001305114.4 → NP_001292043.1  ADP-ribosylation factor-like protein 6

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000019
      UniProtKB/TrEMBL
      A0A1D5PWK2, A0A8V0XZR6
      Related
      ENSGALP00010009480.1, ENSGALT00010016906.1
      Conserved Domains (1) summary
      cd04157
      Location:19 → 180
      Arl6; Arf-like 6 (Arl6) GTPase

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      91401326..91420020
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046940057.1 → XP_046796013.1  ADP-ribosylation factor-like protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A1L1RMR6, A0A8V0XZR6

    2. XM_025149357.3 → XP_025005125.1  ADP-ribosylation factor-like protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWK2, A0A8V0XZR6
      Conserved Domains (1) summary
      cd04157
      Location:19 → 180
      Arl6; Arf-like 6 (Arl6) GTPase

    3. XM_046940065.1 → XP_046796021.1  ADP-ribosylation factor-like protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWK2, A0A8V0XZR6

    4. XM_015296312.4 → XP_015151798.1  ADP-ribosylation factor-like protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A1L1RMR6, A0A8V0XZR6
      Related
      ENSGALP00010009487.1, ENSGALT00010016921.1
      Conserved Domains (2) summary
      smart00178
      Location:3 → 181
      SAR; Sar1p-like members of the Ras-family of small GTPases
      cd04157
      Location:19 → 180
      Arl6; Arf-like 6 (Arl6) GTPase

    5. XM_046940066.1 → XP_046796022.1  ADP-ribosylation factor-like protein 6 isoform X3

    6. XM_046940076.1 → XP_046796032.1  ADP-ribosylation factor-like protein 6 isoform X4

    7. XM_025149361.3 → XP_025005129.2  ADP-ribosylation factor-like protein 6 isoform X3

      Conserved Domains (1) summary
      cl38936
      Location:19 → 118
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    8. XM_046940061.1 → XP_046796017.1  ADP-ribosylation factor-like protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A1L1RMR6, A0A8V0XZR6

    9. XM_025149359.2 → XP_025005127.1  ADP-ribosylation factor-like protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWK2, A0A8V0XZR6
      Conserved Domains (1) summary
      cd04157
      Location:19 → 180
      Arl6; Arf-like 6 (Arl6) GTPase

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      91436043..91454687
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046907839.1 → XP_046763795.1  ADP-ribosylation factor-like protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A1L1RMR6, A0A8V0XZR6

    2. XM_046907841.1 → XP_046763797.1  ADP-ribosylation factor-like protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWK2, A0A8V0XZR6

    3. XM_046907838.1 → XP_046763794.1  ADP-ribosylation factor-like protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A1L1RMR6, A0A8V0XZR6

    4. XM_046907843.1 → XP_046763799.1  ADP-ribosylation factor-like protein 6 isoform X3

    5. XM_046907845.1 → XP_046763801.1  ADP-ribosylation factor-like protein 6 isoform X4

    6. XM_046907844.1 → XP_046763800.1  ADP-ribosylation factor-like protein 6 isoform X3

    7. XM_046907840.1 → XP_046763796.1  ADP-ribosylation factor-like protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A1L1RMR6, A0A8V0XZR6

    8. XM_046907842.1 → XP_046763798.1  ADP-ribosylation factor-like protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWK2, A0A8V0XZR6

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001030788.1: Suppressed sequence

      Description
      NM_001030788.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein Strain
    Heading Accession and Version

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